Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LRRC34P1-201ENST00000542742 915 ntBASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AC090888.2-201ENST00000559765 1144 ntBASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AC010487.1-201ENST00000594408 1172 ntBASIC5.05□□□□□ -1.6
LMO3Q8TAP4 BNIP3P32-201ENST00000600015 554 ntBASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 DUXAP10-204ENST00000612052 616 ntBASIC5.05□□□□□ -1.6
LMO3Q8TAP4 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AL445528.2-201ENST00000620582 470 ntBASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AC006963.1-201ENST00000624003 1052 ntBASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AC011815.3-201ENST00000624194 473 ntBASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AC019226.2-201ENST00000625973 424 ntBASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AC131971.1-201ENST00000332881 1482 ntBASIC5.05□□□□□ -1.6
LMO3Q8TAP4 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.05□□□□□ -1.6
LMO3Q8TAP4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AC135352.1-201ENST00000506173 1418 ntBASIC5.05□□□□□ -1.6
LMO3Q8TAP4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.05□□□□□ -1.6
LMO3Q8TAP4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AC005261.6-201ENST00000623072 1387 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AL645733.1-201ENST00000402250 217 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AL590762.4-201ENST00000425885 253 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AC008072.1-201ENST00000434254 824 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 OR1H1P-201ENST00000448731 937 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 RPL23AP37-201ENST00000479658 549 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 RPL23AP73-201ENST00000492507 471 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 RPL36AP41-201ENST00000493820 306 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AC025164.1-201ENST00000496249 478 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 NAMPTP2-201ENST00000505629 1115 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 PRELID3BP5-201ENST00000508612 460 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 OR7H2P-201ENST00000513483 306 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 RN7SKP265-201ENST00000516448 223 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 SOX5P1-201ENST00000524155 1127 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AP001922.4-201ENST00000526967 290 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AL110118.1-201ENST00000553543 400 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 RN7SL652P-201ENST00000577769 300 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 MIR3667-201ENST00000581025 74 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AC073137.1-201ENST00000605636 634 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 COX6CP4-201ENST00000605798 228 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AC211433.2-201ENST00000608433 387 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AL121652.1-201ENST00000608851 448 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 AC087683.2-201ENST00000611384 326 ntBASIC5.04□□□□□ -1.6
LMO3Q8TAP4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LMO3Q8TAP4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO3Q8TAP4 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO3Q8TAP4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO3Q8TAP4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO3Q8TAP4 RNA5SP87-201ENST00000384155 118 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 MTND4P13-201ENST00000402078 1023 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.03□□□□□ -1.6
LMO3Q8TAP4 BX510359.2-201ENST00000417920 305 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 AC140479.3-201ENST00000418944 1126 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 AC092570.3-201ENST00000420113 693 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 AC007394.1-201ENST00000421941 531 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 Z74021.1-201ENST00000423610 407 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 AC104837.2-201ENST00000427236 424 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 AL392003.1-201ENST00000434394 243 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 MOB1AP2-201ENST00000446060 614 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.03□□□□□ -1.6
LMO3Q8TAP4 snoU109.3-201ENST00000459477 145 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 AC090142.1-201ENST00000465776 462 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 AK4P6-201ENST00000505168 528 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.03□□□□□ -1.6
LMO3Q8TAP4 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.03□□□□□ -1.6
LMO3Q8TAP4 RNA5SP446-201ENST00000515955 82 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 RNU2-30P-201ENST00000516209 141 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 SNORA76.2-201ENST00000517095 137 ntBASIC5.03□□□□□ -1.6
LMO3Q8TAP4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.03□□□□□ -1.6
LMO3Q8TAP4 C1DP5-201ENST00000525775 383 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms