Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 COX6CP15-201ENST00000426313 211 ntBASIC6.77□□□□□ -1.33
VPS8Q8N3P4 AL161722.1-201ENST00000446972 1032 ntBASIC6.77□□□□□ -1.33
VPS8Q8N3P4 ABCF2P2-201ENST00000450549 296 ntBASIC6.77□□□□□ -1.33
VPS8Q8N3P4 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 RNA5SP246-201ENST00000458909 119 ntBASIC6.77□□□□□ -1.33
VPS8Q8N3P4 PPIAP21-201ENST00000464473 501 ntBASIC6.77□□□□□ -1.33
VPS8Q8N3P4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 RN7SKP21-201ENST00000516503 220 ntBASIC6.77□□□□□ -1.33
VPS8Q8N3P4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 AL023881.1-201ENST00000621088 301 ntBASIC6.77□□□□□ -1.33
VPS8Q8N3P4 AL356317.1-201ENST00000396110 1436 ntBASIC6.77□□□□□ -1.33
VPS8Q8N3P4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 VDAC1P6-201ENST00000430062 855 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 RN7SL817P-201ENST00000480777 288 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 AC108145.1-201ENST00000503770 153 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 AC106806.2-201ENST00000509365 500 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 RNA5SP73-201ENST00000516744 108 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 RPL21P7-201ENST00000557463 483 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 AC006116.5-201ENST00000591936 559 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 AC016717.3-201ENST00000624730 554 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 RNA5SP36-201ENST00000410197 133 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 RN7SKP33-201ENST00000410942 340 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 AC004975.1-201ENST00000428733 208 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 AL512326.1-201ENST00000443050 721 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 AC105233.3-201ENST00000531125 744 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 AC006064.5-201ENST00000541782 248 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 AC011477.5-201ENST00000586571 259 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 AL591034.3-201ENST00000605511 685 ntBASIC6.76□□□□□ -1.33
VPS8Q8N3P4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.76□□□□□ -1.33
VPS8Q8N3P4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VPS8Q8N3P4 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VPS8Q8N3P4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VPS8Q8N3P4 AP001157.1-201ENST00000550837 2339 ntBASIC6.75□□□□□ -1.33
VPS8Q8N3P4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
VPS8Q8N3P4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC6.75□□□□□ -1.33
VPS8Q8N3P4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VPS8Q8N3P4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VPS8Q8N3P4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.75□□□□□ -1.33
VPS8Q8N3P4 RNU1-13P-201ENST00000384499 162 ntBASIC6.75□□□□□ -1.33
VPS8Q8N3P4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.75□□□□□ -1.33
VPS8Q8N3P4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.75□□□□□ -1.33
VPS8Q8N3P4 AC007064.3-201ENST00000422608 359 ntBASIC6.75□□□□□ -1.33
VPS8Q8N3P4 AC020898.1-201ENST00000474167 787 ntBASIC6.75□□□□□ -1.33
VPS8Q8N3P4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC6.75□□□□□ -1.33
VPS8Q8N3P4 GTF2IP11-201ENST00000526931 420 ntBASIC6.75□□□□□ -1.33
VPS8Q8N3P4 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.75□□□□□ -1.33
VPS8Q8N3P4 ARF4P1-201ENST00000605447 541 ntBASIC6.75□□□□□ -1.33
VPS8Q8N3P4 MIR492-201ENST00000638676 116 ntBASIC6.75□□□□□ -1.33
VPS8Q8N3P4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 AC104260.2-201ENST00000623551 3497 ntBASIC6.74□□□□□ -1.33
VPS8Q8N3P4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 RNU1-94P-201ENST00000362627 173 ntBASIC6.74□□□□□ -1.33
VPS8Q8N3P4 RNA5SP175-201ENST00000364275 119 ntBASIC6.74□□□□□ -1.33
VPS8Q8N3P4 RN7SKP186-201ENST00000365371 303 ntBASIC6.74□□□□□ -1.33
VPS8Q8N3P4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 MIR195-201ENST00000385194 87 ntBASIC6.74□□□□□ -1.33
VPS8Q8N3P4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 AL121878.1-201ENST00000418638 859 ntBASIC6.74□□□□□ -1.33
VPS8Q8N3P4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.74□□□□□ -1.33
VPS8Q8N3P4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 RN7SL600P-201ENST00000581811 299 ntBASIC6.74□□□□□ -1.33
VPS8Q8N3P4 AL139041.1-201ENST00000605480 610 ntBASIC6.74□□□□□ -1.33
VPS8Q8N3P4 MIR8059-201ENST00000620427 81 ntBASIC6.74□□□□□ -1.33
VPS8Q8N3P4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VPS8Q8N3P4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
VPS8Q8N3P4 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms