Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC111000.3-201ENST00000508057 576 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 SNORA19.3-201ENST00000516165 130 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 GTF2IP11-201ENST00000526931 420 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE4Q8N205 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE4Q8N205 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE4Q8N205 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE4Q8N205 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE4Q8N205 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
SYNE4Q8N205 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE4Q8N205 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE4Q8N205 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SYNE4Q8N205 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE4Q8N205 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE4Q8N205 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE4Q8N205 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SYNE4Q8N205 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE4Q8N205 RPS3AP23-201ENST00000401762 784 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 U3.32-201ENST00000408116 212 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 RSU1P3-201ENST00000412878 835 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 TRIM60P17-201ENST00000415181 719 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 AL158827.1-201ENST00000416300 391 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 AC004690.1-201ENST00000418216 328 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 RSL24D1P6-201ENST00000426934 401 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE4Q8N205 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 AURKAPS2-201ENST00000454983 333 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 SNORD11.1-201ENST00000459482 85 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNE4Q8N205 AC016687.1-201ENST00000482574 353 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 SUMO2P5-201ENST00000506790 245 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNE4Q8N205 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNE4Q8N205 AC098976.1-201ENST00000513014 541 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNE4Q8N205 AC118942.1-201ENST00000529674 1035 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 AC027369.5-201ENST00000533838 755 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 OSBPL9P3-201ENST00000534523 595 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.21□□□□□ -1.42
SYNE4Q8N205 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE4Q8N205 AL160237.3-201ENST00000604114 1013 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 OR51C1P-201ENST00000608504 942 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 AL445423.1-201ENST00000609941 536 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 AL022401.1-201ENST00000619498 108 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE4Q8N205 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE4Q8N205 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SYNE4Q8N205 AC139426.3-201ENST00000605648 2059 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SYNE4Q8N205 SCARNA15-201ENST00000607520 4325 ntBASIC6.21□□□□□ -1.42
SYNE4Q8N205 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE4Q8N205 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE4Q8N205 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 FAM3C2-201ENST00000312214 681 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE4Q8N205 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 RNA5SP241-201ENST00000391326 114 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 ATP5F1P2-201ENST00000398143 760 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 MIR298-201ENST00000401212 88 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 AL021331.1-201ENST00000402817 582 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 AL357515.1-201ENST00000402967 542 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 TXNP5-201ENST00000441043 315 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 AL096829.2-201ENST00000446582 742 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 OR6K5P-201ENST00000447050 945 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 OR1H1P-201ENST00000448731 937 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 MTND4LP2-201ENST00000502312 285 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SYNE4Q8N205 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 RN7SKP276-201ENST00000516242 268 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 AC009643.1-201ENST00000532030 391 ntBASIC6.2□□□□□ -1.42
SYNE4Q8N205 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.2□□□□□ -1.42
SYNE4Q8N205 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms