Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AC006967.1-201ENST00000467608 589 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AK4P6-201ENST00000505168 528 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 HMGB3P13-201ENST00000511263 607 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AC007016.1-201ENST00000512110 244 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 NDUFB4P12-201ENST00000513465 390 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AC008147.3-201ENST00000548666 354 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AC091178.1-203ENST00000584586 279 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AC073091.2-201ENST00000603205 907 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AC008966.2-201ENST00000606157 453 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AL158196.1-201ENST00000616786 434 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AL023881.1-201ENST00000621088 301 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AC091953.3-201ENST00000623220 236 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AL672167.1-203ENST00000641299 2975 ntBASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC65Q8IXS2 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 AL360081.1-201ENST00000428299 555 ntBASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 BRWD1P3-201ENST00000428816 390 ntBASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 AL357520.1-201ENST00000441557 453 ntBASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 AC105233.1-201ENST00000498840 781 ntBASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 MTND4LP2-201ENST00000502312 285 ntBASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 PGBD4P4-201ENST00000509673 613 ntBASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 RNU6-943P-201ENST00000516960 98 ntBASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 AC011270.1-201ENST00000558606 583 ntBASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 AC004232.3-201ENST00000622977 525 ntBASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC65Q8IXS2 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 HSPD1P14-201ENST00000432666 1618 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 KARSP3-201ENST00000571212 1504 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 AC125257.1-201ENST00000560400 2930 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 AC015813.6-201ENST00000624409 5808 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 RNU6-984P-201ENST00000363236 109 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 MIR708-201ENST00000390708 88 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 AL133270.1-201ENST00000402635 279 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 AL589994.1-201ENST00000404962 340 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 VDAC1P9-201ENST00000412766 841 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 RPS12P5-201ENST00000423449 371 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 HSPE1P22-201ENST00000456856 327 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 OR5M2P-201ENST00000529003 936 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 AC115989.2-201ENST00000578640 563 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 AC090312.1-201ENST00000580637 348 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 MIR4480-201ENST00000582492 71 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 ADAD1P2-201ENST00000588476 646 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 AL133338.2-201ENST00000604292 736 ntBASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC65Q8IXS2 ASNSP1-201ENST00000518311 1939 ntBASIC5.09□□□□□ -1.6
CCDC65Q8IXS2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC65Q8IXS2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
CCDC65Q8IXS2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC65Q8IXS2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms