Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 U6atac.1-201ENST00000616025 117 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 AL008636.1-201ENST00000625038 1018 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VRK3Q8IV63 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 AL137058.3-201ENST00000624531 3099 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VRK3Q8IV63 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VRK3Q8IV63 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VRK3Q8IV63 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.41□□□□□ -1.54
VRK3Q8IV63 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
VRK3Q8IV63 CR381670.1-201ENST00000624291 1693 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
VRK3Q8IV63 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC006042.3-201ENST00000454684 1469 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VRK3Q8IV63 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VRK3Q8IV63 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VRK3Q8IV63 RNA5SP242-201ENST00000364171 118 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 RN7SKP6-201ENST00000364795 319 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 RN7SKP69-201ENST00000365390 305 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 Y_RNA.553-201ENST00000384670 102 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 HSPD1P16-201ENST00000402302 394 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 RIMKLBP2-201ENST00000424737 654 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 Z74696.2-201ENST00000436514 498 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC244505.3-201ENST00000454598 187 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 RANP1-206ENST00000455094 651 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 GTF2IP12-201ENST00000456547 356 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC023141.9-201ENST00000458734 412 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 RPL7P51-201ENST00000490532 749 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC104109.1-201ENST00000498563 436 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 C1GALT1P3-201ENST00000522049 819 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 NBEAP1-201ENST00000554452 979 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC022404.1-201ENST00000555320 273 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC234778.2-201ENST00000566241 354 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC074051.3-201ENST00000570238 358 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 H3F3BP2-201ENST00000583907 357 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VRK3Q8IV63 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC011451.2-201ENST00000604303 598 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VRK3Q8IV63 AL356266.1-201ENST00000623311 483 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC132068.1-201ENST00000623805 459 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 AC005618.4-201ENST00000625053 554 ntBASIC5.4□□□□□ -1.54
VRK3Q8IV63 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VRK3Q8IV63 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VRK3Q8IV63 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VRK3Q8IV63 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VRK3Q8IV63 AL356317.1-201ENST00000396110 1436 ntBASIC5.4□□□□□ -1.55
VRK3Q8IV63 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC083899.1-201ENST00000454465 3819 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VRK3Q8IV63 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AL353796.1-201ENST00000561542 3241 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC007938.2-201ENST00000604666 2634 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 RNA5SP234-201ENST00000363916 119 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VRK3Q8IV63 U3.28-201ENST00000391249 210 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 RNA5SP178-201ENST00000410380 128 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 XKRYP4-201ENST00000414395 483 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 GTF2IP2-201ENST00000424290 697 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC138761.5-201ENST00000433967 325 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 AL357520.1-201ENST00000441557 453 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.39□□□□□ -1.55
VRK3Q8IV63 MTCYBP42-201ENST00000444653 1130 ntBASIC5.39□□□□□ -1.55
VRK3Q8IV63 IGBP1P3-201ENST00000447449 1000 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms