Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTR9Q6PD62 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTR9Q6PD62 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTR9Q6PD62 RNA5SP332-201ENST00000391063 115 ntBASIC5.59□□□□□ -1.51
CTR9Q6PD62 RPL7P57-201ENST00000423238 740 ntBASIC5.59□□□□□ -1.51
CTR9Q6PD62 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.59□□□□□ -1.51
CTR9Q6PD62 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTR9Q6PD62 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.59□□□□□ -1.51
CTR9Q6PD62 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.59□□□□□ -1.51
CTR9Q6PD62 CYCSP34-201ENST00000458172 304 ntBASIC5.59□□□□□ -1.51
CTR9Q6PD62 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CTR9Q6PD62 RPL23AP37-201ENST00000479658 549 ntBASIC5.59□□□□□ -1.51
CTR9Q6PD62 TRBV8-1-201ENST00000481590 279 ntBASIC5.59□□□□□ -1.51
CTR9Q6PD62 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.59□□□□□ -1.51
CTR9Q6PD62 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.59□□□□□ -1.51
CTR9Q6PD62 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.59□□□□□ -1.51
CTR9Q6PD62 RNU6-943P-201ENST00000516960 98 ntBASIC5.59□□□□□ -1.51
CTR9Q6PD62 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.59□□□□□ -1.51
CTR9Q6PD62 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.59□□□□□ -1.51
CTR9Q6PD62 AC209154.1-201ENST00000582156 337 ntBASIC5.59□□□□□ -1.51
CTR9Q6PD62 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.59□□□□□ -1.51
CTR9Q6PD62 AC068790.4-201ENST00000602474 263 ntBASIC5.59□□□□□ -1.51
CTR9Q6PD62 AL713998.2-201ENST00000604538 1198 ntBASIC5.59□□□□□ -1.51
CTR9Q6PD62 AC097505.1-201ENST00000610199 565 ntBASIC5.59□□□□□ -1.51
CTR9Q6PD62 AL391597.1-201ENST00000618707 694 ntBASIC5.59□□□□□ -1.51
CTR9Q6PD62 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.59□□□□□ -1.51
CTR9Q6PD62 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.59□□□□□ -1.51
CTR9Q6PD62 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.59□□□□□ -1.51
CTR9Q6PD62 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.59□□□□□ -1.51
CTR9Q6PD62 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTR9Q6PD62 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.59□□□□□ -1.52
CTR9Q6PD62 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CTR9Q6PD62 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.59□□□□□ -1.52
CTR9Q6PD62 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CTR9Q6PD62 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTR9Q6PD62 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CTR9Q6PD62 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.58□□□□□ -1.52
CTR9Q6PD62 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.58□□□□□ -1.52
CTR9Q6PD62 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTR9Q6PD62 RNA5SP28-201ENST00000363841 119 ntBASIC5.58□□□□□ -1.52
CTR9Q6PD62 SNORD113.2-201ENST00000364166 89 ntBASIC5.58□□□□□ -1.52
CTR9Q6PD62 ATP5F1P2-201ENST00000398143 760 ntBASIC5.58□□□□□ -1.52
CTR9Q6PD62 LAP3P1-201ENST00000403648 294 ntBASIC5.58□□□□□ -1.52
CTR9Q6PD62 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.58□□□□□ -1.52
CTR9Q6PD62 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.58□□□□□ -1.52
CTR9Q6PD62 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.58□□□□□ -1.52
CTR9Q6PD62 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.58□□□□□ -1.52
CTR9Q6PD62 H2AFZP5-201ENST00000446960 382 ntBASIC5.58□□□□□ -1.52
CTR9Q6PD62 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.58□□□□□ -1.52
CTR9Q6PD62 SEPT7P6-201ENST00000469999 1143 ntBASIC5.58□□□□□ -1.52
CTR9Q6PD62 RPL36AP41-201ENST00000493820 306 ntBASIC5.58□□□□□ -1.52
CTR9Q6PD62 HMGB3P13-201ENST00000511263 607 ntBASIC5.58□□□□□ -1.52
CTR9Q6PD62 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.58□□□□□ -1.52
CTR9Q6PD62 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.58□□□□□ -1.52
CTR9Q6PD62 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.58□□□□□ -1.52
CTR9Q6PD62 AC073137.1-201ENST00000605636 634 ntBASIC5.58□□□□□ -1.52
CTR9Q6PD62 AC096586.2-201ENST00000610260 441 ntBASIC5.58□□□□□ -1.52
CTR9Q6PD62 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.58□□□□□ -1.52
CTR9Q6PD62 MIR8069-1-201ENST00000616627 86 ntBASIC5.58□□□□□ -1.52
CTR9Q6PD62 MIR8069-2-201ENST00000621412 86 ntBASIC5.58□□□□□ -1.52
CTR9Q6PD62 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTR9Q6PD62 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CTR9Q6PD62 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTR9Q6PD62 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CTR9Q6PD62 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTR9Q6PD62 AL121950.1-201ENST00000624993 2077 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 MTND5P23-201ENST00000430812 1655 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 AC245100.2-201ENST00000454544 1679 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 SALL4P2-201ENST00000423288 2910 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTR9Q6PD62 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CTR9Q6PD62 OR4K15-201ENST00000305051 1216 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 RNA5SP397-201ENST00000391323 118 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 AL589994.1-201ENST00000404962 340 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 RN7SKP267-201ENST00000410381 285 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 FAR2P2-201ENST00000413041 594 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 FAR2P4-202ENST00000425399 584 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 AC004938.1-201ENST00000438468 308 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 NPM1P39-201ENST00000449818 867 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 RHEBP2-201ENST00000450289 600 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 AL445433.1-201ENST00000457507 257 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 OR52A4P-201ENST00000472867 958 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 AC006463.2-201ENST00000473326 348 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 AC111000.3-201ENST00000508057 576 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.57□□□□□ -1.52
CTR9Q6PD62 RNA5SP249-201ENST00000516127 99 ntBASIC5.57□□□□□ -1.52
CTR9Q6PD62 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms