Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AF186996.5-201ENST00000418098 904 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC092691.2-201ENST00000461787 803 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC005912.1-201ENST00000495392 255 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 RN7SL808P-201ENST00000496066 299 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 ECM1P2-201ENST00000503354 1577 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 RNA5SP464-201ENST00000516251 108 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 Y_RNA.719-201ENST00000517156 106 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AL049870.4-201ENST00000555741 486 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC044860.2-201ENST00000561005 179 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC018552.3-201ENST00000567416 561 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC016180.1-201ENST00000567945 403 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 IMMP1LP1-201ENST00000605170 488 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AL445222.1-201ENST00000607259 628 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 SNORD91B-202ENST00000608459 222 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC018445.2-201ENST00000622987 260 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AC009229.4-201ENST00000623854 1947 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.42□□□□□ -1.7
NIPAL3Q6P499 AL672167.1-205ENST00000641112 3080 ntBASIC4.42□□□□□ -1.7
NIPAL3Q6P499 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 MIR92A2-201ENST00000385299 75 ntBASIC4.41□□□□□ -1.7
NIPAL3Q6P499 YY1P1-201ENST00000427625 668 ntBASIC4.41□□□□□ -1.7
NIPAL3Q6P499 RBMY2QP-201ENST00000429799 1147 ntBASIC4.41□□□□□ -1.7
NIPAL3Q6P499 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 MTND6P18-201ENST00000439477 513 ntBASIC4.41□□□□□ -1.7
NIPAL3Q6P499 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 RN7SL591P-201ENST00000496150 292 ntBASIC4.41□□□□□ -1.7
NIPAL3Q6P499 AC140172.1-201ENST00000502928 141 ntBASIC4.41□□□□□ -1.7
NIPAL3Q6P499 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 TVP23CP2-201ENST00000571473 623 ntBASIC4.41□□□□□ -1.7
NIPAL3Q6P499 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 MEMO1P5-201ENST00000604810 406 ntBASIC4.41□□□□□ -1.7
NIPAL3Q6P499 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.41□□□□□ -1.7
NIPAL3Q6P499 AC211433.2-201ENST00000608433 387 ntBASIC4.41□□□□□ -1.7
NIPAL3Q6P499 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 AL162233.1-201ENST00000620014 944 ntBASIC4.41□□□□□ -1.7
NIPAL3Q6P499 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 AC027290.2-201ENST00000623210 18662 ntBASIC4.41□□□□□ -1.7
NIPAL3Q6P499 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
NIPAL3Q6P499 AC139713.2-215ENST00000641428 5037 ntBASIC4.4□□□□□ -1.7
NIPAL3Q6P499 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NIPAL3Q6P499 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NIPAL3Q6P499 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.4□□□□□ -1.7
NIPAL3Q6P499 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
NIPAL3Q6P499 OR5T3-201ENST00000303059 1023 ntBASIC4.4□□□□□ -1.71
NIPAL3Q6P499 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NIPAL3Q6P499 AC011155.1-201ENST00000316512 456 ntBASIC4.4□□□□□ -1.71
NIPAL3Q6P499 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NIPAL3Q6P499 RPS27AP11-201ENST00000402798 447 ntBASIC4.4□□□□□ -1.71
NIPAL3Q6P499 AP002530.1-201ENST00000405705 684 ntBASIC4.4□□□□□ -1.71
NIPAL3Q6P499 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.4□□□□□ -1.71
NIPAL3Q6P499 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.4□□□□□ -1.71
NIPAL3Q6P499 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.4□□□□□ -1.71
NIPAL3Q6P499 RPS27P18-201ENST00000431701 247 ntBASIC4.4□□□□□ -1.71
NIPAL3Q6P499 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.4□□□□□ -1.71
NIPAL3Q6P499 RPL12P46-201ENST00000436610 195 ntBASIC4.4□□□□□ -1.71
NIPAL3Q6P499 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms