Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 PDCL3P4-201ENST00000489621 720 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 OR8Q1P-201ENST00000526467 655 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AC010198.2-201ENST00000550612 259 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 IMMP1LP3-201ENST00000604197 224 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AC015712.7-201ENST00000615211 635 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AC078883.4-201ENST00000623218 367 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 DBF4P1-201ENST00000412976 1892 ntBASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC144BQ3MJ40 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 CASC19-204ENST00000641001 2055 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AL118496.1-201ENST00000440201 1812 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 RNU1-74P-201ENST00000384108 171 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 RNU5A-2P-201ENST00000384337 116 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 SPTLC1P2-201ENST00000407089 121 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 RPL6P29-201ENST00000414863 865 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC007394.1-201ENST00000421941 531 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 Z83846.1-201ENST00000446798 265 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC011225.1-201ENST00000457751 369 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 COPS8P2-201ENST00000473228 627 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC006539.1-201ENST00000481419 501 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 RPL38P3-201ENST00000484463 213 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 RPL32P33-201ENST00000487023 394 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC104971.1-201ENST00000495117 578 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC008885.2-201ENST00000509506 930 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 NDUFB4P12-201ENST00000513465 390 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 RNU6-347P-201ENST00000516658 105 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 OR4C2P-201ENST00000530855 1064 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC009027.1-201ENST00000604510 479 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AL133481.2-203ENST00000607558 139 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AP000255.1-201ENST00000610276 676 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC107075.1-201ENST00000613695 314 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC017037.3-201ENST00000625016 472 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 CU459211.1-201ENST00000635667 749 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AL049737.1-201ENST00000413920 1403 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AC114786.1-201ENST00000512892 1415 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 CASC19-248ENST00000641674 1356 ntBASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC144BQ3MJ40 AL353743.4-201ENST00000422653 1547 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 MIR133A2-201ENST00000347538 102 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 SNORD113-6-201ENST00000363345 75 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 RNU4-34P-201ENST00000410431 124 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms