Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 RPL21P7-201ENST00000557463 483 ntBASIC5.45□□□□□ -1.54
RFX7Q2KHR2 AC027455.1-201ENST00000574104 594 ntBASIC5.45□□□□□ -1.54
RFX7Q2KHR2 AC006363.1-201ENST00000603806 463 ntBASIC5.45□□□□□ -1.54
RFX7Q2KHR2 BNIP3P41-202ENST00000616656 861 ntBASIC5.45□□□□□ -1.54
RFX7Q2KHR2 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 AC068724.3-201ENST00000625906 87 ntBASIC5.45□□□□□ -1.54
RFX7Q2KHR2 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 SMG1P4-204ENST00000523028 4131 ntBASIC5.45□□□□□ -1.54
RFX7Q2KHR2 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RFX7Q2KHR2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 RNU1-20P-201ENST00000363314 162 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 RNU1-130P-201ENST00000363930 160 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 OR6C69P-201ENST00000394268 893 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 RN7SKP167-201ENST00000411047 285 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 UBTFL3-201ENST00000418934 1024 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 AP001324.1-201ENST00000428553 399 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 RPL23AP43-201ENST00000446445 471 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 UBTFL6-201ENST00000477929 1024 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 OR11I1P-201ENST00000486033 954 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 RPL23AP97-201ENST00000568955 471 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 MIR3138-201ENST00000585238 82 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 AL139041.1-201ENST00000605480 610 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 AC091979.2-201ENST00000607514 214 ntBASIC5.44□□□□□ -1.54
RFX7Q2KHR2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RFX7Q2KHR2 AC019072.1-201ENST00000604535 1551 ntBASIC5.43□□□□□ -1.54
RFX7Q2KHR2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 RNA5SP307-201ENST00000362863 116 ntBASIC5.43□□□□□ -1.54
RFX7Q2KHR2 RN7SKP27-201ENST00000410684 333 ntBASIC5.43□□□□□ -1.54
RFX7Q2KHR2 CEACAMP8-201ENST00000413902 580 ntBASIC5.43□□□□□ -1.54
RFX7Q2KHR2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 CDY14P-201ENST00000431260 1014 ntBASIC5.43□□□□□ -1.54
RFX7Q2KHR2 CDY12P-201ENST00000440679 1015 ntBASIC5.43□□□□□ -1.54
RFX7Q2KHR2 CDY13P-201ENST00000445813 1015 ntBASIC5.43□□□□□ -1.54
RFX7Q2KHR2 CDY23P-201ENST00000451661 1014 ntBASIC5.43□□□□□ -1.54
RFX7Q2KHR2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 AC010618.1-201ENST00000469924 477 ntBASIC5.43□□□□□ -1.54
RFX7Q2KHR2 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 IGLVIV-65-201ENST00000517313 360 ntBASIC5.43□□□□□ -1.54
RFX7Q2KHR2 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 AC008966.2-201ENST00000606157 453 ntBASIC5.43□□□□□ -1.54
RFX7Q2KHR2 AC006065.6-201ENST00000625201 545 ntBASIC5.43□□□□□ -1.54
RFX7Q2KHR2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
RFX7Q2KHR2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFX7Q2KHR2 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFX7Q2KHR2 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RFX7Q2KHR2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RFX7Q2KHR2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.42□□□□□ -1.54
RFX7Q2KHR2 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.42□□□□□ -1.54
RFX7Q2KHR2 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.42□□□□□ -1.54
RFX7Q2KHR2 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.42□□□□□ -1.54
RFX7Q2KHR2 RN7SL98P-201ENST00000462271 300 ntBASIC5.42□□□□□ -1.54
RFX7Q2KHR2 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.42□□□□□ -1.54
RFX7Q2KHR2 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.42□□□□□ -1.54
RFX7Q2KHR2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.42□□□□□ -1.54
RFX7Q2KHR2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.42□□□□□ -1.54
RFX7Q2KHR2 TRAV8-5-201ENST00000537369 341 ntBASIC5.42□□□□□ -1.54
RFX7Q2KHR2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RFX7Q2KHR2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms