Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CACNA1BQ00975 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CACNA1BQ00975 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 FTH1P16-201ENST00000435241 552 ntBASIC4.36□□□□□ -1.71
CACNA1BQ00975 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 AP001357.1-201ENST00000586304 1053 ntBASIC4.36□□□□□ -1.71
CACNA1BQ00975 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CACNA1BQ00975 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CACNA1BQ00975 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CACNA1BQ00975 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CACNA1BQ00975 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CACNA1BQ00975 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CACNA1BQ00975 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1BQ00975 RN7SKP267-201ENST00000410381 285 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 PPIAP13-201ENST00000434706 478 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 AC097523.2-201ENST00000435551 652 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1BQ00975 SCAND3P1-201ENST00000439854 1060 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 AC135507.2-201ENST00000612443 309 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 AL139254.3-201ENST00000641097 674 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1BQ00975 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1BQ00975 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1BQ00975 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1BQ00975 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1BQ00975 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1BQ00975 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 MIR659-201ENST00000384963 97 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 U3.28-201ENST00000391249 210 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 RPL21P17-201ENST00000397467 475 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 USP9YP36-201ENST00000424581 829 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1BQ00975 USP9YP31-201ENST00000431405 881 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 USP24P1-201ENST00000433802 779 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 RPS17P8-201ENST00000434525 335 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 AC010424.2-201ENST00000607594 443 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1BQ00975 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1BQ00975 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1BQ00975 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CACNA1BQ00975 OR14L1P-202ENST00000641545 3009 ntBASIC4.35□□□□□ -1.71
CACNA1BQ00975 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CACNA1BQ00975 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 RPL7P41-201ENST00000485823 957 ntBASIC4.34□□□□□ -1.71
CACNA1BQ00975 AL358832.1-201ENST00000497800 389 ntBASIC4.34□□□□□ -1.71
CACNA1BQ00975 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.34□□□□□ -1.71
CACNA1BQ00975 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.34□□□□□ -1.71
CACNA1BQ00975 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 GNRHR2P1-201ENST00000555315 631 ntBASIC4.34□□□□□ -1.71
CACNA1BQ00975 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.34□□□□□ -1.71
CACNA1BQ00975 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.34□□□□□ -1.71
CACNA1BQ00975 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.34□□□□□ -1.71
CACNA1BQ00975 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.34□□□□□ -1.71
CACNA1BQ00975 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.34□□□□□ -1.71
CACNA1BQ00975 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC4.34□□□□□ -1.71
CACNA1BQ00975 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.34□□□□□ -1.71
CACNA1BQ00975 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1BQ00975 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms