Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RPL7P9-201ENST00000468715 747 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 AC020893.1-201ENST00000502452 580 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.66□□□□□ -1.98
HSPG2P98160 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.66□□□□□ -1.98
HSPG2P98160 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC2.66□□□□□ -1.98
HSPG2P98160 AC026367.3-201ENST00000619032 590 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.66□□□□□ -1.98
HSPG2P98160 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.66□□□□□ -1.98
HSPG2P98160 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.66□□□□□ -1.98
HSPG2P98160 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC2.66□□□□□ -1.98
HSPG2P98160 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 AL603766.1-201ENST00000407763 664 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 RN7SKP182-201ENST00000410772 298 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 RPS4XP15-201ENST00000489210 795 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2.66□□□□□ -1.98
HSPG2P98160 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.66□□□□□ -1.98
HSPG2P98160 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.66□□□□□ -1.98
HSPG2P98160 MIR4513-201ENST00000581077 86 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HSPG2P98160 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC2.66□□□□□ -1.98
HSPG2P98160 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC2.66□□□□□ -1.98
HSPG2P98160 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 TRIM60P17-201ENST00000415181 719 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC2.66□□□□□ -1.98
HSPG2P98160 NDUFA5P2-201ENST00000519723 344 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC2.66□□□□□ -1.98
HSPG2P98160 AL606490.9-201ENST00000603331 271 ntBASIC2.66□□□□□ -1.98
HSPG2P98160 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC2.66□□□□□ -1.98
HSPG2P98160 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC2.66□□□□□ -1.98
HSPG2P98160 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC2.66□□□□□ -1.98
HSPG2P98160 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
HSPG2P98160 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HSPG2P98160 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
HSPG2P98160 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC2.66□□□□□ -1.98
HSPG2P98160 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
HSPG2P98160 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC2.65□□□□□ -1.98
HSPG2P98160 RPL21P43-201ENST00000425440 472 ntBASIC2.65□□□□□ -1.98
HSPG2P98160 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HSPG2P98160 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC2.65□□□□□ -1.98
HSPG2P98160 AC004980.3-201ENST00000447046 365 ntBASIC2.65□□□□□ -1.98
HSPG2P98160 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.65□□□□□ -1.98
HSPG2P98160 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.65□□□□□ -1.98
HSPG2P98160 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.65□□□□□ -1.98
HSPG2P98160 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.65□□□□□ -1.98
HSPG2P98160 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC2.65□□□□□ -1.98
HSPG2P98160 AC055839.1-201ENST00000634467 498 ntBASIC2.65□□□□□ -1.98
HSPG2P98160 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
HSPG2P98160 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC2.65□□□□□ -1.98
HSPG2P98160 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HSPG2P98160 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
HSPG2P98160 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC2.65□□□□□ -1.98
HSPG2P98160 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.98
HSPG2P98160 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HSPG2P98160 AC140134.1-201ENST00000511830 3544 ntBASIC2.65□□□□□ -1.98
HSPG2P98160 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC2.65□□□□□ -1.98
HSPG2P98160 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC2.65□□□□□ -1.98
HSPG2P98160 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.98
HSPG2P98160 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
HSPG2P98160 UBE2V1P3-201ENST00000439651 417 ntBASIC2.65□□□□□ -1.98
HSPG2P98160 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC2.65□□□□□ -1.98
HSPG2P98160 RPS20P4-201ENST00000461659 355 ntBASIC2.65□□□□□ -1.98
HSPG2P98160 OR5B10P-201ENST00000532869 642 ntBASIC2.65□□□□□ -1.98
HSPG2P98160 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.65□□□□□ -1.98
HSPG2P98160 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
HSPG2P98160 AGGF1P9-201ENST00000561884 913 ntBASIC2.65□□□□□ -1.98
HSPG2P98160 MIR4672-201ENST00000583126 81 ntBASIC2.65□□□□□ -1.98
HSPG2P98160 ELOCP35-201ENST00000604289 336 ntBASIC2.65□□□□□ -1.98
HSPG2P98160 YPEL5P2-201ENST00000605553 359 ntBASIC2.65□□□□□ -1.98
HSPG2P98160 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC2.65□□□□□ -1.98
HSPG2P98160 LINC01808-202ENST00000641680 1116 ntBASIC2.65□□□□□ -1.98
HSPG2P98160 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HSPG2P98160 AL445487.1-201ENST00000415694 1580 ntBASIC2.65□□□□□ -1.98
HSPG2P98160 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HSPG2P98160 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HSPG2P98160 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HSPG2P98160 AC139769.1-204ENST00000472297 1931 ntBASIC2.65□□□□□ -1.99
HSPG2P98160 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HSPG2P98160 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HSPG2P98160 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HSPG2P98160 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HSPG2P98160 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HSPG2P98160 AL356968.2-201ENST00000412769 1257 ntBASIC2.65□□□□□ -1.99
HSPG2P98160 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HSPG2P98160 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms