Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 RPL34P20-201ENST00000442771 351 ntBASIC4.11□□□□□ -1.75
VBP1P61758 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.11□□□□□ -1.75
VBP1P61758 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.11□□□□□ -1.75
VBP1P61758 AC087385.1-201ENST00000475062 312 ntBASIC4.11□□□□□ -1.75
VBP1P61758 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.11□□□□□ -1.75
VBP1P61758 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.11□□□□□ -1.75
VBP1P61758 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.11□□□□□ -1.75
VBP1P61758 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.11□□□□□ -1.75
VBP1P61758 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.11□□□□□ -1.75
VBP1P61758 AC026826.3-201ENST00000561747 158 ntBASIC4.11□□□□□ -1.75
VBP1P61758 AGGF1P8-201ENST00000562979 1000 ntBASIC4.11□□□□□ -1.75
VBP1P61758 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VBP1P61758 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.11□□□□□ -1.75
VBP1P61758 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.11□□□□□ -1.75
VBP1P61758 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.11□□□□□ -1.75
VBP1P61758 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.11□□□□□ -1.75
VBP1P61758 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.11□□□□□ -1.75
VBP1P61758 AL049844.2-201ENST00000604280 628 ntBASIC4.11□□□□□ -1.75
VBP1P61758 AC010201.1-201ENST00000605051 540 ntBASIC4.11□□□□□ -1.75
VBP1P61758 AC022001.1-201ENST00000605193 268 ntBASIC4.11□□□□□ -1.75
VBP1P61758 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.11□□□□□ -1.75
VBP1P61758 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.11□□□□□ -1.75
VBP1P61758 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VBP1P61758 AC109309.2-201ENST00000612597 332 ntBASIC4.11□□□□□ -1.75
VBP1P61758 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VBP1P61758 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.11□□□□□ -1.75
VBP1P61758 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.11□□□□□ -1.75
VBP1P61758 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VBP1P61758 ZNF962P-201ENST00000443465 3140 ntBASIC4.11□□□□□ -1.75
VBP1P61758 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
VBP1P61758 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VBP1P61758 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VBP1P61758 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.11□□□□□ -1.75
VBP1P61758 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 AC132825.1-201ENST00000463573 2247 ntBASIC4.1□□□□□ -1.75
VBP1P61758 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.1□□□□□ -1.75
VBP1P61758 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.1□□□□□ -1.75
VBP1P61758 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VBP1P61758 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VBP1P61758 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VBP1P61758 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.1□□□□□ -1.75
VBP1P61758 UBTFL3-201ENST00000418934 1024 ntBASIC4.1□□□□□ -1.75
VBP1P61758 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.1□□□□□ -1.75
VBP1P61758 RPL23AP25-201ENST00000430973 463 ntBASIC4.1□□□□□ -1.75
VBP1P61758 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.1□□□□□ -1.75
VBP1P61758 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.1□□□□□ -1.75
VBP1P61758 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 AL133477.1-201ENST00000457472 514 ntBASIC4.1□□□□□ -1.75
VBP1P61758 UBTFL6-201ENST00000477929 1024 ntBASIC4.1□□□□□ -1.75
VBP1P61758 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.1□□□□□ -1.75
VBP1P61758 RNA5SP309-201ENST00000516670 106 ntBASIC4.1□□□□□ -1.75
VBP1P61758 RN7SKP260-201ENST00000516907 149 ntBASIC4.1□□□□□ -1.75
VBP1P61758 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.1□□□□□ -1.75
VBP1P61758 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.1□□□□□ -1.75
VBP1P61758 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.1□□□□□ -1.75
VBP1P61758 AC091515.1-201ENST00000548110 679 ntBASIC4.1□□□□□ -1.75
VBP1P61758 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.1□□□□□ -1.75
VBP1P61758 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VBP1P61758 AC124068.1-201ENST00000563131 678 ntBASIC4.1□□□□□ -1.75
VBP1P61758 MIR4458-201ENST00000578872 75 ntBASIC4.1□□□□□ -1.75
VBP1P61758 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.1□□□□□ -1.75
VBP1P61758 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.1□□□□□ -1.75
VBP1P61758 AC067773.1-201ENST00000603284 1094 ntBASIC4.1□□□□□ -1.75
VBP1P61758 AC103792.1-201ENST00000603591 919 ntBASIC4.1□□□□□ -1.75
VBP1P61758 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.1□□□□□ -1.75
VBP1P61758 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.1□□□□□ -1.75
VBP1P61758 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VBP1P61758 AL683826.1-201ENST00000624104 627 ntBASIC4.1□□□□□ -1.75
VBP1P61758 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.1□□□□□ -1.75
VBP1P61758 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VBP1P61758 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.1□□□□□ -1.75
VBP1P61758 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.1□□□□□ -1.75
VBP1P61758 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.1□□□□□ -1.75
VBP1P61758 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VBP1P61758 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
VBP1P61758 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.09□□□□□ -1.75
VBP1P61758 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.09□□□□□ -1.75
VBP1P61758 RN7SKP160-201ENST00000363804 340 ntBASIC4.09□□□□□ -1.75
VBP1P61758 RNU1-63P-201ENST00000383902 164 ntBASIC4.09□□□□□ -1.75
VBP1P61758 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VBP1P61758 GLUD1P9-201ENST00000420997 1173 ntBASIC4.09□□□□□ -1.75
VBP1P61758 AL645608.4-201ENST00000423619 154 ntBASIC4.09□□□□□ -1.75
VBP1P61758 RPS29P14-201ENST00000431518 171 ntBASIC4.09□□□□□ -1.75
VBP1P61758 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.09□□□□□ -1.75
VBP1P61758 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms