Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.32□□□□□ -1.72
ERVFC1-1P60608 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 DEFB130C-202ENST00000530001 230 ntBASIC4.32□□□□□ -1.72
ERVFC1-1P60608 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 AL845552.1-201ENST00000556820 323 ntBASIC4.32□□□□□ -1.72
ERVFC1-1P60608 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 MIR4502-201ENST00000580432 81 ntBASIC4.32□□□□□ -1.72
ERVFC1-1P60608 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 DPRXP5-201ENST00000604662 539 ntBASIC4.32□□□□□ -1.72
ERVFC1-1P60608 OR2AS2P-201ENST00000606902 342 ntBASIC4.32□□□□□ -1.72
ERVFC1-1P60608 AC135507.1-201ENST00000607214 561 ntBASIC4.32□□□□□ -1.72
ERVFC1-1P60608 AL135999.3-201ENST00000610501 812 ntBASIC4.32□□□□□ -1.72
ERVFC1-1P60608 MIR6721-201ENST00000617181 87 ntBASIC4.32□□□□□ -1.72
ERVFC1-1P60608 AC007490.1-201ENST00000624321 703 ntBASIC4.32□□□□□ -1.72
ERVFC1-1P60608 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERVFC1-1P60608 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 SGO1P1-201ENST00000603525 1447 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC005332.5-201ENST00000591222 2919 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 RNU6-623P-201ENST00000363143 105 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 ERHP2-201ENST00000402323 299 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 RPL21P67-201ENST00000402896 478 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 Y_RNA.599-201ENST00000410489 109 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AL365203.2-201ENST00000423444 196 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 GTF2IP2-201ENST00000424290 697 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 OSTCP4-201ENST00000424397 449 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AL035407.1-201ENST00000429211 571 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AL445928.1-201ENST00000435545 222 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AL645936.1-201ENST00000441979 518 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 MTCYBP42-201ENST00000444653 1130 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 EEF1B2P5-201ENST00000444820 548 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC233982.1-201ENST00000451247 436 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC234781.3-201ENST00000452540 973 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 RPL7P32-201ENST00000457119 744 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 RPS23P2-201ENST00000463671 415 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 MTND3P7-201ENST00000474435 343 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AP002884.1-201ENST00000479691 655 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 ATP5LP5-201ENST00000483050 299 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 NIP7P2-201ENST00000485801 544 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC023050.1-201ENST00000498198 304 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 HPRT1P2-201ENST00000505250 544 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC018797.1-201ENST00000510791 255 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 RN7SKP141-201ENST00000516167 338 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 RNA5SP206-201ENST00000516703 121 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 MTCO1P49-201ENST00000523429 802 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 BNIP3P1-201ENST00000547295 580 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC091078.2-201ENST00000557145 559 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC040958.1-201ENST00000561102 201 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC018552.1-201ENST00000562099 811 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
ERVFC1-1P60608 AP001269.3-201ENST00000588718 329 ntBASIC4.31□□□□□ -1.72
ERVFC1-1P60608 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms