Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.09□□□□□ -1.43
RHBDL3P58872 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDL3P58872 AC087894.1-201ENST00000538359 518 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.09□□□□□ -1.43
RHBDL3P58872 MTND4LP24-201ENST00000572277 291 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 AC126365.2-201ENST00000580630 379 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RHBDL3P58872 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RHBDL3P58872 BNIP3P31-201ENST00000604515 566 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 MIR6798-201ENST00000612887 67 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.09□□□□□ -1.43
RHBDL3P58872 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.09□□□□□ -1.43
RHBDL3P58872 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.09□□□□□ -1.43
RHBDL3P58872 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDL3P58872 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
RHBDL3P58872 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDL3P58872 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.09□□□□□ -1.43
RHBDL3P58872 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RHBDL3P58872 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RHBDL3P58872 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RHBDL3P58872 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RHBDL3P58872 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RHBDL3P58872 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.08□□□□□ -1.44
RHBDL3P58872 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDL3P58872 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RHBDL3P58872 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDL3P58872 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDL3P58872 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDL3P58872 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.08□□□□□ -1.44
RHBDL3P58872 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDL3P58872 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDL3P58872 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDL3P58872 RNU11-201ENST00000387069 134 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 CYB5AP4-201ENST00000396692 399 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.08□□□□□ -1.44
RHBDL3P58872 USP9YP9-201ENST00000429406 715 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 MRPL50P1-201ENST00000431951 384 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 AC008072.1-201ENST00000434254 824 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDL3P58872 SDR42E1P3-201ENST00000438345 502 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 AC073648.4-201ENST00000442655 781 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDL3P58872 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.08□□□□□ -1.44
RHBDL3P58872 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.08□□□□□ -1.44
RHBDL3P58872 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
RHBDL3P58872 AC008565.1-201ENST00000509046 885 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDL3P58872 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.08□□□□□ -1.44
RHBDL3P58872 AC010306.1-201ENST00000523223 1117 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 AC083923.1-201ENST00000523708 376 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDL3P58872 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.08□□□□□ -1.44
RHBDL3P58872 AC090751.1-201ENST00000566966 267 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.08□□□□□ -1.44
RHBDL3P58872 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.08□□□□□ -1.44
RHBDL3P58872 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDL3P58872 EIF1P6-201ENST00000600054 334 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 AL360012.1-201ENST00000602813 131 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 MIR6820-201ENST00000611508 62 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 AL034370.1-201ENST00000397254 1590 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 AC104118.1-201ENST00000607625 1589 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RHBDL3P58872 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.08□□□□□ -1.44
RHBDL3P58872 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.08□□□□□ -1.44
RHBDL3P58872 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
RHBDL3P58872 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.08□□□□□ -1.44
RHBDL3P58872 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDL3P58872 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.08□□□□□ -1.44
RHBDL3P58872 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RHBDL3P58872 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDL3P58872 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC6.07□□□□□ -1.44
RHBDL3P58872 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.07□□□□□ -1.44
RHBDL3P58872 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDL3P58872 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDL3P58872 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.07□□□□□ -1.44
RHBDL3P58872 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDL3P58872 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDL3P58872 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RHBDL3P58872 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RHBDL3P58872 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.07□□□□□ -1.44
RHBDL3P58872 SNORA66-201ENST00000384792 133 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RHBDL3P58872 AP002530.1-201ENST00000405705 684 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 MIR1303-201ENST00000408625 86 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 AC069282.1-201ENST00000411911 526 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDL3P58872 AC241520.1-201ENST00000422654 1099 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 RPL12P34-201ENST00000424532 479 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.07□□□□□ -1.44
RHBDL3P58872 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.07□□□□□ -1.44
RHBDL3P58872 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDL3P58872 ACTR3P2-201ENST00000439585 1257 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.07□□□□□ -1.44
RHBDL3P58872 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.07□□□□□ -1.44
RHBDL3P58872 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.07□□□□□ -1.44
RHBDL3P58872 CCDC75P1-201ENST00000469247 791 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 RPS29P22-201ENST00000472363 168 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 RPL5P22-201ENST00000480199 884 ntBASIC6.07□□□□□ -1.44
RHBDL3P58872 AC010350.1-201ENST00000504908 231 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms