Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SUMO3P55854 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 OR13C1P-202ENST00000641378 2919 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.19□□□□□ -1.58
SUMO3P55854 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 AP000756.2-201ENST00000624168 2567 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.19□□□□□ -1.58
SUMO3P55854 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 LINC02019-201ENST00000608605 2060 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.19□□□□□ -1.58
SUMO3P55854 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.19□□□□□ -1.58
SUMO3P55854 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.19□□□□□ -1.58
SUMO3P55854 RNA5SP30-201ENST00000365552 115 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 SNORD116-23-201ENST00000384645 92 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SUMO3P55854 GAPDHP42-201ENST00000406848 981 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 RNU6-757P-201ENST00000410334 100 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 RNU2-50P-201ENST00000410494 143 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 AC007394.1-201ENST00000421941 531 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 AC099336.2-201ENST00000422457 254 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.19□□□□□ -1.58
SUMO3P55854 TMEM183AP1-205ENST00000432739 290 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.19□□□□□ -1.58
SUMO3P55854 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.19□□□□□ -1.58
SUMO3P55854 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.19□□□□□ -1.58
SUMO3P55854 MTND5P2-201ENST00000442927 1142 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 AC099560.2-201ENST00000457554 255 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.19□□□□□ -1.58
SUMO3P55854 SNORD125-201ENST00000459538 96 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.19□□□□□ -1.58
SUMO3P55854 AC084754.1-201ENST00000463466 464 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 RPL21P71-201ENST00000465598 459 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 RPL7P18-201ENST00000478965 734 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 GAPDHP36-201ENST00000480688 918 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 ATP5LP5-201ENST00000483050 299 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 UBA52P3-201ENST00000491303 382 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 DUTP1-201ENST00000493631 470 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 AC117522.2-201ENST00000510049 657 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.19□□□□□ -1.58
SUMO3P55854 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.19□□□□□ -1.58
SUMO3P55854 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.19□□□□□ -1.58
SUMO3P55854 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.19□□□□□ -1.58
SUMO3P55854 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SUMO3P55854 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.19□□□□□ -1.58
SUMO3P55854 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.19□□□□□ -1.58
SUMO3P55854 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.19□□□□□ -1.58
SUMO3P55854 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.19□□□□□ -1.58
SUMO3P55854 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.19□□□□□ -1.58
SUMO3P55854 OR4K7P-201ENST00000580232 945 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 AP000676.3-201ENST00000623299 569 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SUMO3P55854 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 AC109315.1-201ENST00000584143 1347 ntBASIC5.19□□□□□ -1.58
SUMO3P55854 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.19□□□□□ -1.58
SUMO3P55854 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SUMO3P55854 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SUMO3P55854 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.18□□□□□ -1.58
SUMO3P55854 AL118496.1-201ENST00000440201 1812 ntBASIC5.18□□□□□ -1.58
SUMO3P55854 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SUMO3P55854 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
SUMO3P55854 AL445437.1-201ENST00000623157 3087 ntBASIC5.18□□□□□ -1.58
SUMO3P55854 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SUMO3P55854 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SUMO3P55854 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SUMO3P55854 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SUMO3P55854 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.18□□□□□ -1.58
SUMO3P55854 SGO1P2-201ENST00000429458 1589 ntBASIC5.18□□□□□ -1.58
SUMO3P55854 AC007159.1-201ENST00000566529 4706 ntBASIC5.18□□□□□ -1.58
SUMO3P55854 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.18□□□□□ -1.58
SUMO3P55854 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SUMO3P55854 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SUMO3P55854 RNU6-582P-201ENST00000362989 107 ntBASIC5.18□□□□□ -1.58
SUMO3P55854 AL133264.1-201ENST00000407157 562 ntBASIC5.18□□□□□ -1.58
SUMO3P55854 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.18□□□□□ -1.58
SUMO3P55854 PTP4A1P5-201ENST00000420305 455 ntBASIC5.18□□□□□ -1.58
SUMO3P55854 AC090960.1-201ENST00000421072 306 ntBASIC5.18□□□□□ -1.58
SUMO3P55854 AL365203.2-201ENST00000423444 196 ntBASIC5.18□□□□□ -1.58
SUMO3P55854 AC113412.1-201ENST00000425840 504 ntBASIC5.18□□□□□ -1.58
SUMO3P55854 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.18□□□□□ -1.58
SUMO3P55854 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.18□□□□□ -1.58
SUMO3P55854 GAPDHP48-201ENST00000436626 961 ntBASIC5.18□□□□□ -1.58
SUMO3P55854 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms