Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.21□□□□□ -1.58
VCPP55072 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VCPP55072 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.21□□□□□ -1.58
VCPP55072 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.21□□□□□ -1.58
VCPP55072 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.21□□□□□ -1.58
VCPP55072 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.21□□□□□ -1.58
VCPP55072 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
VCPP55072 AC068446.1-201ENST00000556425 1549 ntBASIC5.21□□□□□ -1.58
VCPP55072 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.21□□□□□ -1.58
VCPP55072 AC010928.1-201ENST00000592477 1447 ntBASIC5.21□□□□□ -1.58
VCPP55072 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VCPP55072 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VCPP55072 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.21□□□□□ -1.58
VCPP55072 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VCPP55072 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.2□□□□□ -1.58
VCPP55072 AC021242.1-201ENST00000507315 2035 ntBASIC5.2□□□□□ -1.58
VCPP55072 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VCPP55072 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VCPP55072 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VCPP55072 LRRC37BP1-201ENST00000398851 714 ntBASIC5.2□□□□□ -1.58
VCPP55072 RPL5P19-201ENST00000404228 893 ntBASIC5.2□□□□□ -1.58
VCPP55072 AL591848.1-201ENST00000413092 322 ntBASIC5.2□□□□□ -1.58
VCPP55072 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VCPP55072 LINC01881-201ENST00000416103 412 ntBASIC5.2□□□□□ -1.58
VCPP55072 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.2□□□□□ -1.58
VCPP55072 AL451062.2-201ENST00000427515 271 ntBASIC5.2□□□□□ -1.58
VCPP55072 RPS29P9-201ENST00000440360 171 ntBASIC5.2□□□□□ -1.58
VCPP55072 RPL7L1P1-201ENST00000448259 785 ntBASIC5.2□□□□□ -1.58
VCPP55072 OR1H1P-201ENST00000448731 937 ntBASIC5.2□□□□□ -1.58
VCPP55072 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.2□□□□□ -1.58
VCPP55072 AL691482.1-201ENST00000453255 87 ntBASIC5.2□□□□□ -1.58
VCPP55072 OR7L1P-201ENST00000456181 380 ntBASIC5.2□□□□□ -1.58
VCPP55072 SNORA84-201ENST00000459229 133 ntBASIC5.2□□□□□ -1.58
VCPP55072 RPS17P2-201ENST00000461663 408 ntBASIC5.2□□□□□ -1.58
VCPP55072 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.2□□□□□ -1.58
VCPP55072 OR52A4P-201ENST00000472867 958 ntBASIC5.2□□□□□ -1.58
VCPP55072 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.2□□□□□ -1.58
VCPP55072 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.2□□□□□ -1.58
VCPP55072 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.2□□□□□ -1.58
VCPP55072 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.2□□□□□ -1.58
VCPP55072 ENPP7P9-201ENST00000514456 627 ntBASIC5.2□□□□□ -1.58
VCPP55072 SNORD116-30-201ENST00000516468 85 ntBASIC5.2□□□□□ -1.58
VCPP55072 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.2□□□□□ -1.58
VCPP55072 AP001880.2-201ENST00000538233 448 ntBASIC5.2□□□□□ -1.58
VCPP55072 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.2□□□□□ -1.58
VCPP55072 NMNAT1P1-201ENST00000554095 876 ntBASIC5.2□□□□□ -1.58
VCPP55072 AL049830.4-201ENST00000555149 351 ntBASIC5.2□□□□□ -1.58
VCPP55072 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.2□□□□□ -1.58
VCPP55072 AC106785.1-201ENST00000565935 262 ntBASIC5.2□□□□□ -1.58
VCPP55072 MIR4429-201ENST00000580105 73 ntBASIC5.2□□□□□ -1.58
VCPP55072 AC023575.1-201ENST00000580510 358 ntBASIC5.2□□□□□ -1.58
VCPP55072 RN7SL690P-201ENST00000582087 240 ntBASIC5.2□□□□□ -1.58
VCPP55072 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.2□□□□□ -1.58
VCPP55072 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.2□□□□□ -1.58
VCPP55072 AL356218.2-201ENST00000605264 187 ntBASIC5.2□□□□□ -1.58
VCPP55072 AC004241.3-201ENST00000611728 517 ntBASIC5.2□□□□□ -1.58
VCPP55072 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.2□□□□□ -1.58
VCPP55072 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VCPP55072 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
VCPP55072 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VCPP55072 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VCPP55072 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VCPP55072 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.2□□□□□ -1.58
VCPP55072 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VCPP55072 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.19□□□□□ -1.58
VCPP55072 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
VCPP55072 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
VCPP55072 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VCPP55072 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VCPP55072 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VCPP55072 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VCPP55072 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VCPP55072 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
VCPP55072 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VCPP55072 UBBP2-201ENST00000376781 231 ntBASIC5.19□□□□□ -1.58
VCPP55072 Z97832.1-201ENST00000402490 328 ntBASIC5.19□□□□□ -1.58
VCPP55072 RN7SKP106-201ENST00000410832 272 ntBASIC5.19□□□□□ -1.58
VCPP55072 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.19□□□□□ -1.58
VCPP55072 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.19□□□□□ -1.58
VCPP55072 TMX2P1-201ENST00000436507 708 ntBASIC5.19□□□□□ -1.58
VCPP55072 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.19□□□□□ -1.58
VCPP55072 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.19□□□□□ -1.58
VCPP55072 AL354714.3-201ENST00000447284 493 ntBASIC5.19□□□□□ -1.58
VCPP55072 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.19□□□□□ -1.58
VCPP55072 HMGB1P4-201ENST00000455362 567 ntBASIC5.19□□□□□ -1.58
VCPP55072 snoU13.22-201ENST00000459428 104 ntBASIC5.19□□□□□ -1.58
VCPP55072 RNA5SP103-201ENST00000459503 118 ntBASIC5.19□□□□□ -1.58
VCPP55072 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.19□□□□□ -1.58
VCPP55072 AC010618.1-201ENST00000469924 477 ntBASIC5.19□□□□□ -1.58
VCPP55072 NPM1P29-201ENST00000483112 803 ntBASIC5.19□□□□□ -1.58
VCPP55072 RNA5SP303-201ENST00000516192 130 ntBASIC5.19□□□□□ -1.58
VCPP55072 AC012339.2-201ENST00000523996 453 ntBASIC5.19□□□□□ -1.58
VCPP55072 AC107918.3-201ENST00000533272 382 ntBASIC5.19□□□□□ -1.58
VCPP55072 AC005868.1-201ENST00000536421 331 ntBASIC5.19□□□□□ -1.58
VCPP55072 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.19□□□□□ -1.58
VCPP55072 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.19□□□□□ -1.58
VCPP55072 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.19□□□□□ -1.58
VCPP55072 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.19□□□□□ -1.58
VCPP55072 VN1R85P-201ENST00000601587 426 ntBASIC5.19□□□□□ -1.58
VCPP55072 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms