Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.56□□□□□ -1.52
COPAP53621 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.56□□□□□ -1.52
COPAP53621 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.56□□□□□ -1.52
COPAP53621 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.56□□□□□ -1.52
COPAP53621 OR51B8P-201ENST00000449892 769 ntBASIC5.56□□□□□ -1.52
COPAP53621 AL035090.1-201ENST00000454835 332 ntBASIC5.56□□□□□ -1.52
COPAP53621 RPL7P32-201ENST00000457119 744 ntBASIC5.56□□□□□ -1.52
COPAP53621 RNU7-27P-201ENST00000459281 62 ntBASIC5.56□□□□□ -1.52
COPAP53621 RPL6P9-201ENST00000466502 859 ntBASIC5.56□□□□□ -1.52
COPAP53621 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 METTL15P1-201ENST00000481421 1045 ntBASIC5.56□□□□□ -1.52
COPAP53621 RN7SL447P-201ENST00000494711 245 ntBASIC5.56□□□□□ -1.52
COPAP53621 AC093752.1-206ENST00000511823 336 ntBASIC5.56□□□□□ -1.52
COPAP53621 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.56□□□□□ -1.52
COPAP53621 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.56□□□□□ -1.52
COPAP53621 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.56□□□□□ -1.52
COPAP53621 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.56□□□□□ -1.52
COPAP53621 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COPAP53621 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.56□□□□□ -1.52
COPAP53621 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.56□□□□□ -1.52
COPAP53621 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COPAP53621 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.56□□□□□ -1.52
COPAP53621 AL365400.2-201ENST00000605604 902 ntBASIC5.56□□□□□ -1.52
COPAP53621 AL445222.1-201ENST00000607259 628 ntBASIC5.56□□□□□ -1.52
COPAP53621 AC004948.1-201ENST00000609858 672 ntBASIC5.56□□□□□ -1.52
COPAP53621 PART1_2.1-201ENST00000612397 250 ntBASIC5.56□□□□□ -1.52
COPAP53621 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
COPAP53621 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.56□□□□□ -1.52
COPAP53621 AC138907.10-201ENST00000623708 983 ntBASIC5.56□□□□□ -1.52
COPAP53621 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
COPAP53621 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COPAP53621 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.56□□□□□ -1.52
COPAP53621 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.56□□□□□ -1.52
COPAP53621 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
COPAP53621 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COPAP53621 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
COPAP53621 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
COPAP53621 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COPAP53621 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COPAP53621 AL031595.2-201ENST00000624215 19071 ntBASIC5.55□□□□□ -1.52
COPAP53621 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COPAP53621 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.55□□□□□ -1.52
COPAP53621 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
COPAP53621 AC092079.1-201ENST00000558620 1985 ntBASIC5.55□□□□□ -1.52
COPAP53621 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COPAP53621 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COPAP53621 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COPAP53621 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COPAP53621 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COPAP53621 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
COPAP53621 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COPAP53621 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
COPAP53621 RNA5SP326-201ENST00000363209 110 ntBASIC5.55□□□□□ -1.52
COPAP53621 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COPAP53621 TAS2R15P-201ENST00000390674 928 ntBASIC5.55□□□□□ -1.52
COPAP53621 AL645927.1-201ENST00000396783 406 ntBASIC5.55□□□□□ -1.52
COPAP53621 AL035419.1-201ENST00000397037 564 ntBASIC5.55□□□□□ -1.52
COPAP53621 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.55□□□□□ -1.52
COPAP53621 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.55□□□□□ -1.52
COPAP53621 AC096921.1-201ENST00000411661 375 ntBASIC5.55□□□□□ -1.52
COPAP53621 AL590609.2-201ENST00000421430 368 ntBASIC5.55□□□□□ -1.52
COPAP53621 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.55□□□□□ -1.52
COPAP53621 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.55□□□□□ -1.52
COPAP53621 USP9YP24-201ENST00000434374 697 ntBASIC5.55□□□□□ -1.52
COPAP53621 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.55□□□□□ -1.52
COPAP53621 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.55□□□□□ -1.52
COPAP53621 AC092170.1-201ENST00000440211 356 ntBASIC5.55□□□□□ -1.52
COPAP53621 USP9YP17-201ENST00000444617 696 ntBASIC5.55□□□□□ -1.52
COPAP53621 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.55□□□□□ -1.52
COPAP53621 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.55□□□□□ -1.52
COPAP53621 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.55□□□□□ -1.52
COPAP53621 RN7SL826P-201ENST00000479724 288 ntBASIC5.55□□□□□ -1.52
COPAP53621 AC104687.1-201ENST00000485829 412 ntBASIC5.55□□□□□ -1.52
COPAP53621 AC023050.1-201ENST00000498198 304 ntBASIC5.55□□□□□ -1.52
COPAP53621 AC111193.1-201ENST00000504097 155 ntBASIC5.55□□□□□ -1.52
COPAP53621 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COPAP53621 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.55□□□□□ -1.52
COPAP53621 RNA5SP303-201ENST00000516192 130 ntBASIC5.55□□□□□ -1.52
COPAP53621 RNU6-311P-201ENST00000516224 102 ntBASIC5.55□□□□□ -1.52
COPAP53621 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.55□□□□□ -1.52
COPAP53621 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.55□□□□□ -1.52
COPAP53621 PMS2P3-207ENST00000529061 717 ntBASIC5.55□□□□□ -1.52
COPAP53621 AC107918.3-201ENST00000533272 382 ntBASIC5.55□□□□□ -1.52
COPAP53621 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.55□□□□□ -1.52
COPAP53621 MTND3P12-201ENST00000559068 328 ntBASIC5.55□□□□□ -1.52
COPAP53621 ATP5F1P7-201ENST00000567330 760 ntBASIC5.55□□□□□ -1.52
COPAP53621 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COPAP53621 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.55□□□□□ -1.52
COPAP53621 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.55□□□□□ -1.52
COPAP53621 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.55□□□□□ -1.52
COPAP53621 AC106052.1-201ENST00000608029 497 ntBASIC5.55□□□□□ -1.52
COPAP53621 RPSAP73-201ENST00000614820 330 ntBASIC5.55□□□□□ -1.52
COPAP53621 AC104985.3-201ENST00000623479 597 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms