Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.94□□□□□ -1.62
CASP4P49662 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.94□□□□□ -1.62
CASP4P49662 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CASP4P49662 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CASP4P49662 AL513533.1-201ENST00000453728 415 ntBASIC4.94□□□□□ -1.62
CASP4P49662 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.94□□□□□ -1.62
CASP4P49662 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.94□□□□□ -1.62
CASP4P49662 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.94□□□□□ -1.62
CASP4P49662 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.94□□□□□ -1.62
CASP4P49662 AC093720.1-201ENST00000505681 714 ntBASIC4.94□□□□□ -1.62
CASP4P49662 BTG4P1-201ENST00000510421 183 ntBASIC4.94□□□□□ -1.62
CASP4P49662 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
CASP4P49662 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.94□□□□□ -1.62
CASP4P49662 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.94□□□□□ -1.62
CASP4P49662 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.94□□□□□ -1.62
CASP4P49662 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.94□□□□□ -1.62
CASP4P49662 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.94□□□□□ -1.62
CASP4P49662 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.94□□□□□ -1.62
CASP4P49662 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.94□□□□□ -1.62
CASP4P49662 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.94□□□□□ -1.62
CASP4P49662 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.94□□□□□ -1.62
CASP4P49662 AC103792.1-201ENST00000603591 919 ntBASIC4.94□□□□□ -1.62
CASP4P49662 AC008966.2-201ENST00000606157 453 ntBASIC4.94□□□□□ -1.62
CASP4P49662 AP002360.3-201ENST00000607673 710 ntBASIC4.94□□□□□ -1.62
CASP4P49662 NF1P10-201ENST00000613227 742 ntBASIC4.94□□□□□ -1.62
CASP4P49662 BNIP3P41-202ENST00000616656 861 ntBASIC4.94□□□□□ -1.62
CASP4P49662 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CASP4P49662 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.94□□□□□ -1.62
CASP4P49662 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.94□□□□□ -1.62
CASP4P49662 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.94□□□□□ -1.62
CASP4P49662 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CASP4P49662 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.94□□□□□ -1.62
CASP4P49662 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CASP4P49662 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.94□□□□□ -1.62
CASP4P49662 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CASP4P49662 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CASP4P49662 EOGT-210ENST00000615922 1931 ntBASIC4.93□□□□□ -1.62
CASP4P49662 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.93□□□□□ -1.62
CASP4P49662 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CASP4P49662 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CASP4P49662 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CASP4P49662 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CASP4P49662 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CASP4P49662 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CASP4P49662 RNU6-697P-201ENST00000363348 107 ntBASIC4.93□□□□□ -1.62
CASP4P49662 OR13C3-201ENST00000374781 1108 ntBASIC4.93□□□□□ -1.62
CASP4P49662 RNU1-63P-201ENST00000383902 164 ntBASIC4.93□□□□□ -1.62
CASP4P49662 GLULP6-201ENST00000399502 913 ntBASIC4.93□□□□□ -1.62
CASP4P49662 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CASP4P49662 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.93□□□□□ -1.62
CASP4P49662 AL590139.1-201ENST00000416267 400 ntBASIC4.93□□□□□ -1.62
CASP4P49662 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.93□□□□□ -1.62
CASP4P49662 AC106901.1-201ENST00000425086 698 ntBASIC4.93□□□□□ -1.62
CASP4P49662 RPS12P10-201ENST00000427031 377 ntBASIC4.93□□□□□ -1.62
CASP4P49662 MTCO1P51-201ENST00000427672 1060 ntBASIC4.93□□□□□ -1.62
CASP4P49662 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.93□□□□□ -1.62
CASP4P49662 RPL23AP43-201ENST00000446445 471 ntBASIC4.93□□□□□ -1.62
CASP4P49662 OR6C72P-201ENST00000451403 892 ntBASIC4.93□□□□□ -1.62
CASP4P49662 RPS29P33-201ENST00000456717 146 ntBASIC4.93□□□□□ -1.62
CASP4P49662 OR52A4P-201ENST00000472867 958 ntBASIC4.93□□□□□ -1.62
CASP4P49662 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.93□□□□□ -1.62
CASP4P49662 AC063949.1-201ENST00000552900 865 ntBASIC4.93□□□□□ -1.62
CASP4P49662 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.93□□□□□ -1.62
CASP4P49662 LINC00622-201ENST00000562811 1570 ntBASIC4.93□□□□□ -1.62
CASP4P49662 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.93□□□□□ -1.62
CASP4P49662 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.93□□□□□ -1.62
CASP4P49662 AC140113.4-201ENST00000622087 222 ntBASIC4.93□□□□□ -1.62
CASP4P49662 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.93□□□□□ -1.62
CASP4P49662 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.93□□□□□ -1.62
CASP4P49662 AC021106.3-201ENST00000623925 531 ntBASIC4.93□□□□□ -1.62
CASP4P49662 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.93□□□□□ -1.62
CASP4P49662 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.93□□□□□ -1.62
CASP4P49662 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CASP4P49662 MAPK10-263ENST00000641052 4307 ntBASIC4.93□□□□□ -1.62
CASP4P49662 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.93□□□□□ -1.62
CASP4P49662 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.93□□□□□ -1.62
CASP4P49662 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CASP4P49662 LINC01355-201ENST00000566551 5444 ntBASIC4.93□□□□□ -1.62
CASP4P49662 NXPH1-205ENST00000602349 1953 ntBASIC4.93□□□□□ -1.62
CASP4P49662 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CASP4P49662 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.92□□□□□ -1.62
CASP4P49662 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CASP4P49662 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.92□□□□□ -1.62
CASP4P49662 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.92□□□□□ -1.62
CASP4P49662 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CASP4P49662 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CASP4P49662 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CASP4P49662 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CASP4P49662 AC139769.1-204ENST00000472297 1931 ntBASIC4.92□□□□□ -1.62
CASP4P49662 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CASP4P49662 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CASP4P49662 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CASP4P49662 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CASP4P49662 RNU6-398P-201ENST00000384143 109 ntBASIC4.92□□□□□ -1.62
CASP4P49662 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.92□□□□□ -1.62
CASP4P49662 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CASP4P49662 RPS16P5-201ENST00000406501 404 ntBASIC4.92□□□□□ -1.62
CASP4P49662 SNORA11B-201ENST00000408175 129 ntBASIC4.92□□□□□ -1.62
CASP4P49662 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.92□□□□□ -1.62
CASP4P49662 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms