Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC147055.3-201ENST00000510547 851 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 AC067904.2-201ENST00000517322 1283 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 BUD31P1-201ENST00000521828 359 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 MORF4L1P3-201ENST00000525966 950 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CR1P49238 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CR1P49238 RN7SL802P-201ENST00000577858 299 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.15□□□□□ -1.75
CX3CR1P49238 MIR5699-201ENST00000578903 90 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.15□□□□□ -1.75
CX3CR1P49238 AC022726.1-201ENST00000587475 207 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.15□□□□□ -1.75
CX3CR1P49238 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.15□□□□□ -1.75
CX3CR1P49238 RPL26P30-202ENST00000602923 645 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 FAM27B-201ENST00000610601 213 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 AC116447.1-201ENST00000613153 453 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 AC004232.3-201ENST00000622977 525 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.15□□□□□ -1.75
CX3CR1P49238 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.15□□□□□ -1.75
CX3CR1P49238 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.15□□□□□ -1.75
CX3CR1P49238 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.15□□□□□ -1.75
CX3CR1P49238 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CR1P49238 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CR1P49238 ASNSP1-201ENST00000518311 1939 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CR1P49238 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CR1P49238 AC087190.4-201ENST00000574616 8334 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CX3CR1P49238 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CR1P49238 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CR1P49238 AC090971.4-201ENST00000560291 1800 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CX3CR1P49238 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CR1P49238 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CX3CR1P49238 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CR1P49238 MIR195-201ENST00000385194 87 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 SNORD96B-201ENST00000386148 79 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 RNU1-82P-201ENST00000390851 165 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CR1P49238 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CR1P49238 RNU6-603P-201ENST00000411403 107 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 RPL7P57-201ENST00000423238 740 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.14□□□□□ -1.75
CX3CR1P49238 PPIAP13-201ENST00000434706 478 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.14□□□□□ -1.75
CX3CR1P49238 RPS6P2-201ENST00000454208 705 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.14□□□□□ -1.75
CX3CR1P49238 SEPT14P1-201ENST00000458703 648 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 EIF2S2P4-201ENST00000461070 984 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 RPL7AP28-201ENST00000464513 571 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 RN7SL629P-201ENST00000489622 285 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 AC104971.1-201ENST00000495117 578 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 RPS4XP18-201ENST00000495480 763 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 ATG10-AS1-201ENST00000504846 648 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.14□□□□□ -1.75
CX3CR1P49238 RNU1-6P-201ENST00000516290 144 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.14□□□□□ -1.75
CX3CR1P49238 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 GCSHP4-201ENST00000538792 439 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.14□□□□□ -1.75
CX3CR1P49238 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.14□□□□□ -1.75
CX3CR1P49238 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.14□□□□□ -1.75
CX3CR1P49238 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CR1P49238 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.14□□□□□ -1.75
CX3CR1P49238 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CR1P49238 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CR1P49238 AC087763.1-201ENST00000603391 286 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 AC011453.2-201ENST00000603737 729 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 AC087283.1-201ENST00000604029 1074 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 HMGB1P51-201ENST00000605166 638 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 COX6CP4-201ENST00000605798 228 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 AC090948.2-201ENST00000607363 564 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.14□□□□□ -1.75
CX3CR1P49238 AL359757.1-201ENST00000623176 255 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 AC112694.2-201ENST00000623697 768 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 AC079298.2-201ENST00000623885 459 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CR1P49238 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CR1P49238 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CR1P49238 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CR1P49238 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CR1P49238 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CR1P49238 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CX3CR1P49238 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CR1P49238 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.14□□□□□ -1.75
CX3CR1P49238 SAMMSON-226ENST00000642089 1582 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CX3CR1P49238 AC010329.2-201ENST00000595195 2737 ntBASIC4.14□□□□□ -1.75
CX3CR1P49238 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 AC093535.2-201ENST00000624769 2326 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.13□□□□□ -1.75
CX3CR1P49238 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CX3CR1P49238 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CX3CR1P49238 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CX3CR1P49238 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CX3CR1P49238 NCLP2-201ENST00000416078 1462 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AL672167.1-203ENST00000641299 2975 ntBASIC4.13□□□□□ -1.75
CX3CR1P49238 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms