Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL15A1P39059 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COL15A1P39059 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
COL15A1P39059 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
COL15A1P39059 AC116158.1-201ENST00000560231 2129 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 AC108751.5-201ENST00000492880 1336 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL15A1P39059 DHX9P1-201ENST00000436565 3076 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.1□□□□□ -1.43
COL15A1P39059 LINC00993-201ENST00000420453 540 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.1□□□□□ -1.43
COL15A1P39059 MTCYBP32-201ENST00000427945 1084 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.1□□□□□ -1.43
COL15A1P39059 RPL12P28-201ENST00000430852 489 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 RPS26P4-201ENST00000431743 355 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL15A1P39059 RPL35AP21-201ENST00000437667 333 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 HMGN1P5-201ENST00000448591 263 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 Z95152.1-201ENST00000453556 656 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 PPIAP21-201ENST00000464473 501 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL15A1P39059 AC093801.2-201ENST00000503966 1050 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.1□□□□□ -1.43
COL15A1P39059 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.1□□□□□ -1.43
COL15A1P39059 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
COL15A1P39059 AC233266.2-201ENST00000567067 528 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.1□□□□□ -1.43
COL15A1P39059 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
COL15A1P39059 AC008782.1-201ENST00000603386 430 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 QTRT1P1-201ENST00000604344 1078 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 AC005156.1-201ENST00000613371 573 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 AP000648.2-201ENST00000624182 404 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.1□□□□□ -1.43
COL15A1P39059 FRG1EP-201ENST00000634469 770 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.1□□□□□ -1.43
COL15A1P39059 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL15A1P39059 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL15A1P39059 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL15A1P39059 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL15A1P39059 AC002525.1-201ENST00000624392 1622 ntBASIC6.1□□□□□ -1.43
COL15A1P39059 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.1□□□□□ -1.43
COL15A1P39059 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL15A1P39059 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL15A1P39059 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.09□□□□□ -1.43
COL15A1P39059 SAMMSON-210ENST00000641260 1308 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL15A1P39059 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
COL15A1P39059 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL15A1P39059 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL15A1P39059 AC007068.1-201ENST00000396690 844 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.09□□□□□ -1.43
COL15A1P39059 OR51B3P-201ENST00000412287 913 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 QRSL1P2-201ENST00000418582 964 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 GLUD1P9-201ENST00000420997 1173 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 UQCRBP1-201ENST00000421129 336 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.09□□□□□ -1.43
COL15A1P39059 AC073052.1-201ENST00000440417 714 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.09□□□□□ -1.43
COL15A1P39059 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.09□□□□□ -1.43
COL15A1P39059 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.09□□□□□ -1.43
COL15A1P39059 RN7SL41P-201ENST00000476144 297 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.09□□□□□ -1.43
COL15A1P39059 AC073358.1-201ENST00000505671 684 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 MTCO1P31-201ENST00000506355 492 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.09□□□□□ -1.43
COL15A1P39059 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.09□□□□□ -1.43
COL15A1P39059 AC103833.1-201ENST00000517442 172 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.09□□□□□ -1.43
COL15A1P39059 AC068831.4-201ENST00000556118 109 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.09□□□□□ -1.43
COL15A1P39059 AC005242.1-201ENST00000585658 438 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL15A1P39059 AL445984.1-201ENST00000637834 659 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL15A1P39059 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL15A1P39059 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.09□□□□□ -1.43
COL15A1P39059 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
COL15A1P39059 AC005261.6-201ENST00000623072 1387 ntBASIC6.09□□□□□ -1.43
COL15A1P39059 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.09□□□□□ -1.44
COL15A1P39059 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL15A1P39059 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.09□□□□□ -1.44
COL15A1P39059 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
COL15A1P39059 AC025574.1-201ENST00000554784 1653 ntBASIC6.08□□□□□ -1.44
COL15A1P39059 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL15A1P39059 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL15A1P39059 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL15A1P39059 MTATP6P31-201ENST00000406985 692 ntBASIC6.08□□□□□ -1.44
COL15A1P39059 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.08□□□□□ -1.44
COL15A1P39059 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.08□□□□□ -1.44
COL15A1P39059 MTCO2P1-201ENST00000424648 477 ntBASIC6.08□□□□□ -1.44
COL15A1P39059 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.08□□□□□ -1.44
COL15A1P39059 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.08□□□□□ -1.44
COL15A1P39059 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.08□□□□□ -1.44
COL15A1P39059 Z99127.2-201ENST00000441426 334 ntBASIC6.08□□□□□ -1.44
COL15A1P39059 MOB1AP2-201ENST00000446060 614 ntBASIC6.08□□□□□ -1.44
COL15A1P39059 BTF3P6-201ENST00000448054 499 ntBASIC6.08□□□□□ -1.44
COL15A1P39059 RAB28P3-201ENST00000448325 597 ntBASIC6.08□□□□□ -1.44
COL15A1P39059 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.08□□□□□ -1.44
COL15A1P39059 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.08□□□□□ -1.44
COL15A1P39059 AC105918.1-201ENST00000474399 838 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms