Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 EIF4HP2-201ENST00000424380 563 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 CKS1BP6-201ENST00000424932 240 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 RPS24P8-201ENST00000431490 402 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD13P35453 AC092013.1-201ENST00000438795 332 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD13P35453 CEACAMP7-201ENST00000444105 496 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 AC112498.1-201ENST00000444401 332 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD13P35453 AC012512.1-201ENST00000446594 718 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 RHEBP2-201ENST00000450289 600 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD13P35453 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD13P35453 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD13P35453 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD13P35453 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD13P35453 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD13P35453 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD13P35453 NDUFA5P12-201ENST00000503796 343 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 AC010627.1-201ENST00000503819 1294 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD13P35453 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD13P35453 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD13P35453 GAPDHP56-201ENST00000506031 988 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 AC021006.3-201ENST00000530771 192 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD13P35453 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD13P35453 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD13P35453 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXD13P35453 AC019206.1-201ENST00000621938 425 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 AC097460.3-201ENST00000623099 442 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD13P35453 AP000720.1-201ENST00000625091 483 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 HSPD1P11-201ENST00000508643 1702 ntBASIC5.33□□□□□ -1.56
HOXD13P35453 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD13P35453 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HOXD13P35453 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD13P35453 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXD13P35453 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD13P35453 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD13P35453 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 PCAT14-202ENST00000627127 3935 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXD13P35453 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
HOXD13P35453 GTF2H2B-203ENST00000508065 1432 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXD13P35453 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 AC000374.1-201ENST00000434698 1745 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HOXD13P35453 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HOXD13P35453 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 AC017079.1-201ENST00000333650 415 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXD13P35453 U3.30-201ENST00000391308 210 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 AL589647.1-201ENST00000402485 466 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 PTGES3P2-201ENST00000407942 482 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 OR51B3P-201ENST00000412287 913 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXD13P35453 MTCO3P4-201ENST00000419236 787 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXD13P35453 GTF3AP5-201ENST00000442645 697 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 AC069540.1-201ENST00000446320 988 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 AC104687.1-201ENST00000485829 412 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 RN7SL214P-201ENST00000487317 265 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 IGLV2-34-201ENST00000490007 283 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 AC069304.1-201ENST00000491593 704 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 RN7SL591P-201ENST00000496150 292 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 AC147055.3-201ENST00000510547 851 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXD13P35453 RNU6-709P-201ENST00000517257 104 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXD13P35453 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXD13P35453 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXD13P35453 OR1F2P-201ENST00000570470 933 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXD13P35453 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXD13P35453 AF230666.2-201ENST00000602328 725 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 AC123786.2-201ENST00000603459 275 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 AC005034.4-201ENST00000603612 899 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 CR381572.2-201ENST00000624852 397 ntBASIC5.32□□□□□ -1.56
HOXD13P35453 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXD13P35453 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXD13P35453 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXD13P35453 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXD13P35453 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXD13P35453 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD13P35453 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXD13P35453 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD13P35453 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD13P35453 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms