Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 AC091153.1-201ENST00000466297 402 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 AC112206.1-201ENST00000468416 477 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.99□□□□□ -1.29
CLIP1P30622 AC008958.1-201ENST00000511047 682 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 RNA5SP497-201ENST00000516081 97 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 SNORA31.9-201ENST00000516429 84 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.99□□□□□ -1.29
CLIP1P30622 HMGB2P1-201ENST00000591146 634 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 Z98200.1-201ENST00000607298 470 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 AC005086.4-201ENST00000623065 213 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CLIP1P30622 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC6.99□□□□□ -1.29
CLIP1P30622 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CLIP1P30622 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.99□□□□□ -1.29
CLIP1P30622 AP001002.1-201ENST00000625148 1513 ntBASIC6.99□□□□□ -1.29
CLIP1P30622 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CLIP1P30622 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CLIP1P30622 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CLIP1P30622 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CLIP1P30622 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CLIP1P30622 RNU1-94P-201ENST00000362627 173 ntBASIC6.98□□□□□ -1.29
CLIP1P30622 AL161909.1-201ENST00000397390 712 ntBASIC6.98□□□□□ -1.29
CLIP1P30622 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.98□□□□□ -1.29
CLIP1P30622 BTF3P10-201ENST00000433415 495 ntBASIC6.98□□□□□ -1.29
CLIP1P30622 RPS26P2-201ENST00000440331 348 ntBASIC6.98□□□□□ -1.29
CLIP1P30622 AC105137.1-201ENST00000484355 562 ntBASIC6.98□□□□□ -1.29
CLIP1P30622 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.98□□□□□ -1.29
CLIP1P30622 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.98□□□□□ -1.29
CLIP1P30622 RN7SL176P-201ENST00000580352 264 ntBASIC6.98□□□□□ -1.29
CLIP1P30622 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.98□□□□□ -1.29
CLIP1P30622 AL161637.1-201ENST00000622380 412 ntBASIC6.98□□□□□ -1.29
CLIP1P30622 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CLIP1P30622 HSPD1P14-201ENST00000432666 1618 ntBASIC6.98□□□□□ -1.29
CLIP1P30622 AC107068.1-201ENST00000563286 4218 ntBASIC6.98□□□□□ -1.29
CLIP1P30622 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CLIP1P30622 ASNSP1-204ENST00000641977 1664 ntBASIC6.97□□□□□ -1.29
CLIP1P30622 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CLIP1P30622 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CLIP1P30622 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.97□□□□□ -1.29
CLIP1P30622 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.97□□□□□ -1.29
CLIP1P30622 MIR1271-201ENST00000408537 86 ntBASIC6.97□□□□□ -1.29
CLIP1P30622 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.97□□□□□ -1.29
CLIP1P30622 RPL34P6-201ENST00000432390 345 ntBASIC6.97□□□□□ -1.29
CLIP1P30622 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.97□□□□□ -1.29
CLIP1P30622 OR5BC1P-201ENST00000529327 739 ntBASIC6.97□□□□□ -1.29
CLIP1P30622 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CLIP1P30622 AL353726.1-201ENST00000614041 1000 ntBASIC6.97□□□□□ -1.29
CLIP1P30622 SNX18P1Y-201ENST00000616231 511 ntBASIC6.97□□□□□ -1.29
CLIP1P30622 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CLIP1P30622 AC091905.2-201ENST00000623143 306 ntBASIC6.97□□□□□ -1.29
CLIP1P30622 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC6.97□□□□□ -1.29
CLIP1P30622 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.97□□□□□ -1.29
CLIP1P30622 FP325313.1-201ENST00000638228 703 ntBASIC6.97□□□□□ -1.29
CLIP1P30622 AC005261.4-201ENST00000600047 1385 ntBASIC6.97□□□□□ -1.29
CLIP1P30622 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CLIP1P30622 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CLIP1P30622 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.96□□□□□ -1.29
CLIP1P30622 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CLIP1P30622 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.96□□□□□ -1.3
CLIP1P30622 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
CLIP1P30622 RNU1-64P-201ENST00000365443 163 ntBASIC6.96□□□□□ -1.3
CLIP1P30622 AL445189.1-201ENST00000405722 338 ntBASIC6.96□□□□□ -1.3
CLIP1P30622 CASKP1-201ENST00000412870 582 ntBASIC6.96□□□□□ -1.3
CLIP1P30622 CDC27P1-201ENST00000445384 715 ntBASIC6.96□□□□□ -1.3
CLIP1P30622 HSFY6P-201ENST00000445573 403 ntBASIC6.96□□□□□ -1.3
CLIP1P30622 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.96□□□□□ -1.3
CLIP1P30622 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.96□□□□□ -1.3
CLIP1P30622 PGBD4P4-201ENST00000509673 613 ntBASIC6.96□□□□□ -1.3
CLIP1P30622 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.96□□□□□ -1.3
CLIP1P30622 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.96□□□□□ -1.3
CLIP1P30622 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC6.96□□□□□ -1.3
CLIP1P30622 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.96□□□□□ -1.3
CLIP1P30622 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.96□□□□□ -1.3
CLIP1P30622 AC090948.2-201ENST00000607363 564 ntBASIC6.96□□□□□ -1.3
CLIP1P30622 AC104118.1-201ENST00000607625 1589 ntBASIC6.96□□□□□ -1.3
CLIP1P30622 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
CLIP1P30622 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
CLIP1P30622 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
CLIP1P30622 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP1P30622 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.95□□□□□ -1.3
CLIP1P30622 AC068870.3-201ENST00000625077 2536 ntBASIC6.95□□□□□ -1.3
CLIP1P30622 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CLIP1P30622 AL359643.1-201ENST00000404109 423 ntBASIC6.95□□□□□ -1.3
CLIP1P30622 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.95□□□□□ -1.3
CLIP1P30622 AL157831.1-201ENST00000426134 473 ntBASIC6.95□□□□□ -1.3
CLIP1P30622 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.95□□□□□ -1.3
CLIP1P30622 HMGB1P23-201ENST00000518743 568 ntBASIC6.95□□□□□ -1.3
CLIP1P30622 AP001804.2-201ENST00000533932 910 ntBASIC6.95□□□□□ -1.3
CLIP1P30622 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.95□□□□□ -1.3
CLIP1P30622 MIR4472-2-201ENST00000582069 67 ntBASIC6.95□□□□□ -1.3
CLIP1P30622 AC022106.2-201ENST00000620114 757 ntBASIC6.95□□□□□ -1.3
CLIP1P30622 RNA5SP196-201ENST00000625967 102 ntBASIC6.95□□□□□ -1.3
CLIP1P30622 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CLIP1P30622 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP1P30622 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP1P30622 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP1P30622 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CLIP1P30622 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP1P30622 AC099654.3-201ENST00000447087 1546 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms