Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RNU6-317P-201ENST00000384031 107 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 RNU1-106P-201ENST00000384382 164 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 MIR130A-201ENST00000385274 89 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 VTI1BP4-201ENST00000427516 527 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 AC234064.1-201ENST00000436312 247 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 AC006466.1-201ENST00000438721 289 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 MTCYBP31-201ENST00000438855 1122 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.31□□□□□ -1.4
CNGA1P29973 NPM1P13-201ENST00000452663 865 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 AL035090.1-201ENST00000454835 332 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.31□□□□□ -1.4
CNGA1P29973 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.31□□□□□ -1.4
CNGA1P29973 RPL21P6-201ENST00000479171 504 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNGA1P29973 IGJP1-201ENST00000522682 475 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 MTATP6P15-201ENST00000527233 835 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.31□□□□□ -1.4
CNGA1P29973 AP000676.2-201ENST00000529711 301 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 MTCO2P15-201ENST00000532655 656 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.31□□□□□ -1.4
CNGA1P29973 AC023050.2-201ENST00000544968 387 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 AC126615.2-201ENST00000553003 515 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 NPM1P42-201ENST00000560329 862 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 AC023813.2-201ENST00000564321 469 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.31□□□□□ -1.4
CNGA1P29973 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.31□□□□□ -1.4
CNGA1P29973 MTND4LP24-201ENST00000572277 291 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 AC016839.1-201ENST00000578162 867 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.31□□□□□ -1.4
CNGA1P29973 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.31□□□□□ -1.4
CNGA1P29973 AC015688.2-201ENST00000584523 262 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.31□□□□□ -1.4
CNGA1P29973 AP001542.2-201ENST00000593141 364 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 VN1R83P-201ENST00000595685 445 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.31□□□□□ -1.4
CNGA1P29973 AC025857.2-201ENST00000602711 238 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 MTND3P19-201ENST00000603825 345 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 LSM1P2-201ENST00000604911 322 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.31□□□□□ -1.4
CNGA1P29973 AC092608.3-201ENST00000625017 386 ntBASIC6.31□□□□□ -1.4
CNGA1P29973 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.31□□□□□ -1.4
CNGA1P29973 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CNGA1P29973 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CNGA1P29973 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CNGA1P29973 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNGA1P29973 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNGA1P29973 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CNGA1P29973 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.31□□□□□ -1.4
CNGA1P29973 AL359955.1-201ENST00000455242 3275 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CNGA1P29973 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNGA1P29973 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.3□□□□□ -1.4
CNGA1P29973 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNGA1P29973 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNGA1P29973 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CNGA1P29973 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CNGA1P29973 RNA5SP305-201ENST00000362665 119 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 SNORA56-201ENST00000383966 129 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 SNORA67-201ENST00000384423 137 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 AC119751.3-201ENST00000399720 670 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.3□□□□□ -1.4
CNGA1P29973 AL079342.2-201ENST00000403367 482 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 AC093162.1-201ENST00000419682 124 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CNGA1P29973 RPF2P1-201ENST00000424137 906 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CNGA1P29973 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.3□□□□□ -1.4
CNGA1P29973 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.3□□□□□ -1.4
CNGA1P29973 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.3□□□□□ -1.4
CNGA1P29973 CBX1P4-201ENST00000439415 457 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.3□□□□□ -1.4
CNGA1P29973 AC073850.1-201ENST00000449243 255 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.3□□□□□ -1.4
CNGA1P29973 AC073522.1-201ENST00000483312 377 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.3□□□□□ -1.4
CNGA1P29973 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.3□□□□□ -1.4
CNGA1P29973 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.3□□□□□ -1.4
CNGA1P29973 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6.3□□□□□ -1.4
CNGA1P29973 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC6.3□□□□□ -1.4
CNGA1P29973 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.3□□□□□ -1.4
CNGA1P29973 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.3□□□□□ -1.4
CNGA1P29973 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.3□□□□□ -1.4
CNGA1P29973 MTND3P13-201ENST00000574391 343 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.3□□□□□ -1.4
CNGA1P29973 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.3□□□□□ -1.4
CNGA1P29973 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.3□□□□□ -1.4
CNGA1P29973 AL513327.3-201ENST00000602618 469 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.3□□□□□ -1.4
CNGA1P29973 AC016877.3-201ENST00000606778 504 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 AL445423.1-201ENST00000609941 536 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.3□□□□□ -1.4
CNGA1P29973 AP002799.1-201ENST00000623552 423 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 AC068057.2-201ENST00000624047 895 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 AC015726.3-201ENST00000624501 418 ntBASIC6.3□□□□□ -1.4
CNGA1P29973 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNGA1P29973 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CNGA1P29973 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.3□□□□□ -1.4
CNGA1P29973 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CNGA1P29973 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.3□□□□□ -1.4
CNGA1P29973 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms