Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.85□□□□□ -1.63
CASP1P29466 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.85□□□□□ -1.63
CASP1P29466 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CASP1P29466 OR5AN2P-201ENST00000534535 896 ntBASIC4.85□□□□□ -1.63
CASP1P29466 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.85□□□□□ -1.63
CASP1P29466 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.85□□□□□ -1.63
CASP1P29466 AC079587.1-201ENST00000603846 277 ntBASIC4.85□□□□□ -1.63
CASP1P29466 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.85□□□□□ -1.63
CASP1P29466 AL669942.2-201ENST00000620352 697 ntBASIC4.85□□□□□ -1.63
CASP1P29466 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CASP1P29466 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.85□□□□□ -1.63
CASP1P29466 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CASP1P29466 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CASP1P29466 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.85□□□□□ -1.63
CASP1P29466 AC063923.1-201ENST00000478982 1619 ntBASIC4.85□□□□□ -1.63
CASP1P29466 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CASP1P29466 AL078595.2-201ENST00000605309 1780 ntBASIC4.85□□□□□ -1.63
CASP1P29466 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CASP1P29466 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CASP1P29466 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CASP1P29466 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CASP1P29466 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CASP1P29466 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CASP1P29466 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CASP1P29466 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.84□□□□□ -1.63
CASP1P29466 AC120338.1-201ENST00000625074 1541 ntBASIC4.84□□□□□ -1.63
CASP1P29466 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CASP1P29466 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CASP1P29466 MIR3065-201ENST00000390137 79 ntBASIC4.84□□□□□ -1.63
CASP1P29466 AL590139.1-201ENST00000416267 400 ntBASIC4.84□□□□□ -1.63
CASP1P29466 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.84□□□□□ -1.63
CASP1P29466 NDUFA5P1-201ENST00000433858 341 ntBASIC4.84□□□□□ -1.63
CASP1P29466 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.84□□□□□ -1.63
CASP1P29466 HLA-N-201ENST00000437516 135 ntBASIC4.84□□□□□ -1.63
CASP1P29466 RPL7P33-201ENST00000444159 742 ntBASIC4.84□□□□□ -1.63
CASP1P29466 GEMIN8P3-201ENST00000445417 720 ntBASIC4.84□□□□□ -1.63
CASP1P29466 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.84□□□□□ -1.63
CASP1P29466 RPS29P33-201ENST00000456717 146 ntBASIC4.84□□□□□ -1.63
CASP1P29466 RPL7AP10-201ENST00000481016 791 ntBASIC4.84□□□□□ -1.63
CASP1P29466 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
CASP1P29466 STMN1P2-201ENST00000508435 439 ntBASIC4.84□□□□□ -1.63
CASP1P29466 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.84□□□□□ -1.63
CASP1P29466 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.84□□□□□ -1.63
CASP1P29466 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.84□□□□□ -1.63
CASP1P29466 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CASP1P29466 AP002981.1-201ENST00000517692 975 ntBASIC4.84□□□□□ -1.63
CASP1P29466 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.84□□□□□ -1.63
CASP1P29466 AL352979.3-201ENST00000553515 247 ntBASIC4.84□□□□□ -1.63
CASP1P29466 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.84□□□□□ -1.63
CASP1P29466 AC027176.2-201ENST00000559166 746 ntBASIC4.84□□□□□ -1.63
CASP1P29466 AC055839.1-201ENST00000634467 498 ntBASIC4.84□□□□□ -1.63
CASP1P29466 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.84□□□□□ -1.64
CASP1P29466 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CASP1P29466 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CASP1P29466 AL137100.1-201ENST00000556703 1620 ntBASIC4.83□□□□□ -1.64
CASP1P29466 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CASP1P29466 AC025031.4-201ENST00000621248 3271 ntBASIC4.83□□□□□ -1.64
CASP1P29466 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CASP1P29466 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.83□□□□□ -1.64
CASP1P29466 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CASP1P29466 AC016588.2-201ENST00000632484 3021 ntBASIC4.83□□□□□ -1.64
CASP1P29466 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.83□□□□□ -1.64
CASP1P29466 MIR129-1-201ENST00000384972 72 ntBASIC4.83□□□□□ -1.64
CASP1P29466 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CASP1P29466 AL133270.1-201ENST00000402635 279 ntBASIC4.83□□□□□ -1.64
CASP1P29466 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.83□□□□□ -1.64
CASP1P29466 RN7SKP216-201ENST00000411050 312 ntBASIC4.83□□□□□ -1.64
CASP1P29466 GSTM3P2-201ENST00000412746 530 ntBASIC4.83□□□□□ -1.64
CASP1P29466 AC092570.3-201ENST00000420113 693 ntBASIC4.83□□□□□ -1.64
CASP1P29466 AL358176.3-201ENST00000420757 454 ntBASIC4.83□□□□□ -1.64
CASP1P29466 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.83□□□□□ -1.64
CASP1P29466 PRELID3BP10-201ENST00000431957 584 ntBASIC4.83□□□□□ -1.64
CASP1P29466 AL162591.2-201ENST00000449634 317 ntBASIC4.83□□□□□ -1.64
CASP1P29466 VN1R32P-201ENST00000452234 905 ntBASIC4.83□□□□□ -1.64
CASP1P29466 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.83□□□□□ -1.64
CASP1P29466 PSMC1P13-201ENST00000458195 985 ntBASIC4.83□□□□□ -1.64
CASP1P29466 AC231760.1-201ENST00000498002 260 ntBASIC4.83□□□□□ -1.64
CASP1P29466 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.83□□□□□ -1.64
CASP1P29466 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.83□□□□□ -1.64
CASP1P29466 GTF2IP11-201ENST00000526931 420 ntBASIC4.83□□□□□ -1.64
CASP1P29466 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.83□□□□□ -1.64
CASP1P29466 TRAV8-5-201ENST00000537369 341 ntBASIC4.83□□□□□ -1.64
CASP1P29466 AP005119.2-201ENST00000579735 1105 ntBASIC4.83□□□□□ -1.64
CASP1P29466 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.83□□□□□ -1.64
CASP1P29466 AC093765.1-201ENST00000603758 881 ntBASIC4.83□□□□□ -1.64
CASP1P29466 AC004948.1-201ENST00000609858 672 ntBASIC4.83□□□□□ -1.64
CASP1P29466 AL445363.3-201ENST00000623080 671 ntBASIC4.83□□□□□ -1.64
CASP1P29466 AC019278.1-201ENST00000623516 479 ntBASIC4.83□□□□□ -1.64
CASP1P29466 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CASP1P29466 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CASP1P29466 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CASP1P29466 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.83□□□□□ -1.64
CASP1P29466 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CASP1P29466 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.82□□□□□ -1.64
CASP1P29466 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CASP1P29466 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CASP1P29466 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CASP1P29466 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.82□□□□□ -1.64
CASP1P29466 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CASP1P29466 AL139039.2-201ENST00000407436 479 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms