Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC026688.1-201ENST00000520639 1168 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AP000676.2-201ENST00000529711 301 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC007423.1-201ENST00000605009 627 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC242628.1-201ENST00000606810 391 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AP001521.2-201ENST00000608772 546 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC009318.3-201ENST00000616916 503 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC112694.2-201ENST00000623697 768 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC015726.3-201ENST00000624501 418 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC009643.2-201ENST00000603543 1448 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC008758.3-201ENST00000507003 1829 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 RNU4-31P-201ENST00000384211 141 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 Z86062.1-201ENST00000406773 777 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 TMBIM7P-201ENST00000418074 855 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 RPS27P18-201ENST00000431701 247 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 RPL7P11-201ENST00000437586 658 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 RPL12P3-201ENST00000440080 396 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 RPL34P26-201ENST00000445636 354 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 snoU13.20-201ENST00000459180 104 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 BNIP3P1-201ENST00000547295 580 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 MIR4646-201ENST00000580775 63 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC133552.5-201ENST00000604266 540 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC100814.1-201ENST00000606963 623 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC243654.2-201ENST00000612843 443 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AP004607.9-201ENST00000618202 316 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC091905.4-201ENST00000623432 202 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC116563.2-201ENST00000624751 535 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 CR381572.2-201ENST00000624852 397 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC099654.2-201ENST00000433031 1980 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 AC131971.1-201ENST00000332881 1482 ntBASIC4.94□□□□□ -1.62
HLA-DPA1P20036 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.94□□□□□ -1.62
HLA-DPA1P20036 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 RN7SKP95-201ENST00000362860 303 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 RNU6-452P-201ENST00000384406 107 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 AL357515.1-201ENST00000402967 542 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 RNA5SP345-201ENST00000410646 108 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 GTF2IP5-201ENST00000414608 731 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 AC016769.2-201ENST00000414815 475 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 TBCAP2-201ENST00000416175 326 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 AL358176.3-201ENST00000420757 454 ntBASIC4.93□□□□□ -1.62
HLA-DPA1P20036 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HLA-DPA1P20036 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms