Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.87□□□□□ -1.63
RETP07949 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RETP07949 AC093535.2-201ENST00000624769 2326 ntBASIC4.87□□□□□ -1.63
RETP07949 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RETP07949 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.87□□□□□ -1.63
RETP07949 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RETP07949 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RETP07949 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.87□□□□□ -1.63
RETP07949 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.87□□□□□ -1.63
RETP07949 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RETP07949 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.87□□□□□ -1.63
RETP07949 AC011447.7-201ENST00000624228 1590 ntBASIC4.87□□□□□ -1.63
RETP07949 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RETP07949 CCT8P1-201ENST00000413611 1657 ntBASIC4.86□□□□□ -1.63
RETP07949 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.86□□□□□ -1.63
RETP07949 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RETP07949 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RETP07949 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RETP07949 AL359837.1-201ENST00000381357 287 ntBASIC4.86□□□□□ -1.63
RETP07949 RNA5SP397-201ENST00000391323 118 ntBASIC4.86□□□□□ -1.63
RETP07949 AC013429.2-201ENST00000418798 781 ntBASIC4.86□□□□□ -1.63
RETP07949 RPS29P9-201ENST00000440360 171 ntBASIC4.86□□□□□ -1.63
RETP07949 AL031584.1-201ENST00000447169 754 ntBASIC4.86□□□□□ -1.63
RETP07949 PTMAP3-201ENST00000447474 330 ntBASIC4.86□□□□□ -1.63
RETP07949 AL359073.1-201ENST00000448036 403 ntBASIC4.86□□□□□ -1.63
RETP07949 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RETP07949 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.86□□□□□ -1.63
RETP07949 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.86□□□□□ -1.63
RETP07949 AC011276.1-201ENST00000469688 323 ntBASIC4.86□□□□□ -1.63
RETP07949 AC116562.1-201ENST00000485355 781 ntBASIC4.86□□□□□ -1.63
RETP07949 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RETP07949 SCARNA22-201ENST00000503991 125 ntBASIC4.86□□□□□ -1.63
RETP07949 AC106806.2-201ENST00000509365 500 ntBASIC4.86□□□□□ -1.63
RETP07949 RNA5SP303-201ENST00000516192 130 ntBASIC4.86□□□□□ -1.63
RETP07949 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.86□□□□□ -1.63
RETP07949 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RETP07949 DYNLL1P4-201ENST00000549314 266 ntBASIC4.86□□□□□ -1.63
RETP07949 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.86□□□□□ -1.63
RETP07949 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RETP07949 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.86□□□□□ -1.63
RETP07949 AC233280.2-201ENST00000603917 1070 ntBASIC4.86□□□□□ -1.63
RETP07949 BNIP3P35-201ENST00000604530 490 ntBASIC4.86□□□□□ -1.63
RETP07949 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.86□□□□□ -1.63
RETP07949 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.86□□□□□ -1.63
RETP07949 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RETP07949 AC063976.2-201ENST00000425667 3556 ntBASIC4.86□□□□□ -1.63
RETP07949 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RETP07949 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
RETP07949 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.86□□□□□ -1.63
RETP07949 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.85□□□□□ -1.63
RETP07949 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.85□□□□□ -1.63
RETP07949 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.85□□□□□ -1.63
RETP07949 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.85□□□□□ -1.63
RETP07949 RNA5SP509-201ENST00000364577 119 ntBASIC4.85□□□□□ -1.63
RETP07949 UBBP2-201ENST00000376781 231 ntBASIC4.85□□□□□ -1.63
RETP07949 OR6C69P-201ENST00000394268 893 ntBASIC4.85□□□□□ -1.63
RETP07949 ATP5HP3-201ENST00000396994 486 ntBASIC4.85□□□□□ -1.63
RETP07949 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.85□□□□□ -1.63
RETP07949 COX6CP13-201ENST00000428703 226 ntBASIC4.85□□□□□ -1.63
RETP07949 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.85□□□□□ -1.63
RETP07949 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.85□□□□□ -1.63
RETP07949 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RETP07949 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RETP07949 AC034236.1-201ENST00000469891 373 ntBASIC4.85□□□□□ -1.63
RETP07949 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.85□□□□□ -1.63
RETP07949 AC098583.1-201ENST00000480875 255 ntBASIC4.85□□□□□ -1.63
RETP07949 AC111000.5-201ENST00000506559 1178 ntBASIC4.85□□□□□ -1.63
RETP07949 AC113430.1-201ENST00000506872 718 ntBASIC4.85□□□□□ -1.63
RETP07949 AC025674.1-201ENST00000507074 324 ntBASIC4.85□□□□□ -1.63
RETP07949 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.85□□□□□ -1.63
RETP07949 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.85□□□□□ -1.63
RETP07949 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.85□□□□□ -1.63
RETP07949 MTCO1P35-201ENST00000515270 228 ntBASIC4.85□□□□□ -1.63
RETP07949 MIR2116-201ENST00000517221 80 ntBASIC4.85□□□□□ -1.63
RETP07949 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RETP07949 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.85□□□□□ -1.63
RETP07949 HNRNPRP2-201ENST00000528421 743 ntBASIC4.85□□□□□ -1.63
RETP07949 AC106785.1-201ENST00000565935 262 ntBASIC4.85□□□□□ -1.63
RETP07949 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.85□□□□□ -1.63
RETP07949 AC007497.1-201ENST00000610421 561 ntBASIC4.85□□□□□ -1.63
RETP07949 FAM27B-201ENST00000610601 213 ntBASIC4.85□□□□□ -1.63
RETP07949 AL121890.3-201ENST00000618494 516 ntBASIC4.85□□□□□ -1.63
RETP07949 AC022106.2-201ENST00000620114 757 ntBASIC4.85□□□□□ -1.63
RETP07949 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RETP07949 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RETP07949 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RETP07949 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RETP07949 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.85□□□□□ -1.63
RETP07949 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RETP07949 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RETP07949 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.85□□□□□ -1.63
RETP07949 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.85□□□□□ -1.63
RETP07949 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.85□□□□□ -1.63
RETP07949 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RETP07949 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RETP07949 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
RETP07949 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.84□□□□□ -1.63
RETP07949 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.84□□□□□ -1.63
RETP07949 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.84□□□□□ -1.63
RETP07949 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms