Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 AC019176.2-201ENST00000611579 315 ntBASIC2.67□□□□□ -1.98
APOBP04114 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
APOBP04114 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
APOBP04114 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 OR4A15-201ENST00000314706 1035 ntBASIC2.67□□□□□ -1.98
APOBP04114 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC2.67□□□□□ -1.98
APOBP04114 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 RNA5SP72-201ENST00000364442 117 ntBASIC2.67□□□□□ -1.98
APOBP04114 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 AL512326.1-201ENST00000443050 721 ntBASIC2.67□□□□□ -1.98
APOBP04114 AL157385.1-201ENST00000446973 268 ntBASIC2.67□□□□□ -1.98
APOBP04114 RNA5SP73-201ENST00000516744 108 ntBASIC2.67□□□□□ -1.98
APOBP04114 AC068993.1-201ENST00000546724 589 ntBASIC2.67□□□□□ -1.98
APOBP04114 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC2.67□□□□□ -1.98
APOBP04114 MIR490-201ENST00000384865 128 ntBASIC2.67□□□□□ -1.98
APOBP04114 AC006499.5-201ENST00000505037 514 ntBASIC2.67□□□□□ -1.98
APOBP04114 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.67□□□□□ -1.98
APOBP04114 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC2.67□□□□□ -1.98
APOBP04114 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.67□□□□□ -1.98
APOBP04114 AC079684.1-201ENST00000621405 437 ntBASIC2.67□□□□□ -1.98
APOBP04114 FP325313.1-201ENST00000638228 703 ntBASIC2.67□□□□□ -1.98
APOBP04114 LINC01808-202ENST00000641680 1116 ntBASIC2.67□□□□□ -1.98
APOBP04114 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
APOBP04114 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 DMD-202ENST00000343523 5623 ntTSL 5 BASIC2.67□□□□□ -1.98
APOBP04114 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
APOBP04114 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC2.67□□□□□ -1.98
APOBP04114 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC2.67□□□□□ -1.98
APOBP04114 LDHAL6CP-202ENST00000550738 3224 ntBASIC2.67□□□□□ -1.98
APOBP04114 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.66□□□□□ -1.98
APOBP04114 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
APOBP04114 ST7-221ENST00000465133 2155 ntTSL 5 BASIC2.66□□□□□ -1.98
APOBP04114 CASC19-204ENST00000641001 2055 ntBASIC2.66□□□□□ -1.98
APOBP04114 RNU6-213P-201ENST00000384051 104 ntBASIC2.66□□□□□ -1.98
APOBP04114 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
APOBP04114 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC2.66□□□□□ -1.98
APOBP04114 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 RPL7P33-201ENST00000444159 742 ntBASIC2.66□□□□□ -1.98
APOBP04114 AC090686.1-201ENST00000481577 749 ntBASIC2.66□□□□□ -1.98
APOBP04114 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.66□□□□□ -1.98
APOBP04114 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.66□□□□□ -1.98
APOBP04114 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.66□□□□□ -1.98
APOBP04114 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC2.66□□□□□ -1.98
APOBP04114 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC2.66□□□□□ -1.98
APOBP04114 AL138721.1-201ENST00000616756 179 ntBASIC2.66□□□□□ -1.98
APOBP04114 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
APOBP04114 AC009779.8-201ENST00000641684 4384 ntBASIC2.66□□□□□ -1.98
APOBP04114 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
APOBP04114 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC2.66□□□□□ -1.98
APOBP04114 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC2.66□□□□□ -1.98
APOBP04114 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
APOBP04114 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 MIR30B-201ENST00000384850 88 ntBASIC2.66□□□□□ -1.98
APOBP04114 NPM1P36-201ENST00000415681 835 ntBASIC2.66□□□□□ -1.98
APOBP04114 RPL35AP21-201ENST00000437667 333 ntBASIC2.66□□□□□ -1.98
APOBP04114 NDUFA5P2-201ENST00000519723 344 ntBASIC2.66□□□□□ -1.98
APOBP04114 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.66□□□□□ -1.98
APOBP04114 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.66□□□□□ -1.98
APOBP04114 MRPS21P9-201ENST00000571150 257 ntBASIC2.66□□□□□ -1.98
APOBP04114 MIR3651-201ENST00000630427 90 ntBASIC2.66□□□□□ -1.98
APOBP04114 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 AC074029.4-201ENST00000624796 1859 ntBASIC2.66□□□□□ -1.98
APOBP04114 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC2.66□□□□□ -1.98
APOBP04114 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
APOBP04114 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 MR1-209ENST00000617803 7584 ntTSL 5 BASIC2.66□□□□□ -1.98
APOBP04114 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC2.66□□□□□ -1.98
APOBP04114 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOBP04114 AC013429.2-201ENST00000418798 781 ntBASIC2.66□□□□□ -1.98
APOBP04114 OR5BE1P-201ENST00000425977 939 ntBASIC2.66□□□□□ -1.98
APOBP04114 AL159987.2-201ENST00000432754 307 ntBASIC2.66□□□□□ -1.98
APOBP04114 UBDP1-202ENST00000457888 382 ntBASIC2.66□□□□□ -1.98
APOBP04114 PPIAP15-201ENST00000479662 484 ntBASIC2.66□□□□□ -1.98
APOBP04114 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.66□□□□□ -1.98
APOBP04114 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms