Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MLECP1-201ENST00000615893 709 ntBASIC5.07□□□□□ -1.6
VTNP04004 AP005019.3-201ENST00000620418 560 ntBASIC5.07□□□□□ -1.6
VTNP04004 AC138965.3-201ENST00000623875 498 ntBASIC5.07□□□□□ -1.6
VTNP04004 AL356094.1-201ENST00000624663 1212 ntBASIC5.07□□□□□ -1.6
VTNP04004 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VTNP04004 AL391684.1-202ENST00000641293 1636 ntBASIC5.07□□□□□ -1.6
VTNP04004 CDC27P2-201ENST00000425026 1922 ntBASIC5.07□□□□□ -1.6
VTNP04004 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.07□□□□□ -1.6
VTNP04004 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VTNP04004 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.06□□□□□ -1.6
VTNP04004 TCP11X1-202ENST00000622971 1372 ntBASIC5.06□□□□□ -1.6
VTNP04004 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.06□□□□□ -1.6
VTNP04004 PROS2P-201ENST00000474651 1951 ntBASIC5.06□□□□□ -1.6
VTNP04004 AC025031.4-201ENST00000621248 3271 ntBASIC5.06□□□□□ -1.6
VTNP04004 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VTNP04004 UGT2B26P-201ENST00000508672 1613 ntBASIC5.06□□□□□ -1.6
VTNP04004 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
VTNP04004 RNU6-618P-201ENST00000363518 112 ntBASIC5.06□□□□□ -1.6
VTNP04004 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
VTNP04004 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.06□□□□□ -1.6
VTNP04004 AL589655.1-201ENST00000405398 482 ntBASIC5.06□□□□□ -1.6
VTNP04004 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.06□□□□□ -1.6
VTNP04004 TMBIM7P-201ENST00000418074 855 ntBASIC5.06□□□□□ -1.6
VTNP04004 ARAFP1-201ENST00000422172 605 ntBASIC5.06□□□□□ -1.6
VTNP04004 OR5M12P-201ENST00000423388 929 ntBASIC5.06□□□□□ -1.6
VTNP04004 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VTNP04004 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.06□□□□□ -1.6
VTNP04004 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.06□□□□□ -1.6
VTNP04004 RHEBP2-201ENST00000450289 600 ntBASIC5.06□□□□□ -1.6
VTNP04004 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.06□□□□□ -1.6
VTNP04004 AC011276.1-201ENST00000469688 323 ntBASIC5.06□□□□□ -1.6
VTNP04004 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.06□□□□□ -1.6
VTNP04004 AC083829.1-201ENST00000503756 657 ntBASIC5.06□□□□□ -1.6
VTNP04004 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.06□□□□□ -1.6
VTNP04004 AC093840.1-201ENST00000511599 336 ntBASIC5.06□□□□□ -1.6
VTNP04004 RNA5SP230-201ENST00000517039 122 ntBASIC5.06□□□□□ -1.6
VTNP04004 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.06□□□□□ -1.6
VTNP04004 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.06□□□□□ -1.6
VTNP04004 TMF1P1-201ENST00000576058 373 ntBASIC5.06□□□□□ -1.6
VTNP04004 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.06□□□□□ -1.6
VTNP04004 AC010487.1-201ENST00000594408 1172 ntBASIC5.06□□□□□ -1.6
VTNP04004 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.06□□□□□ -1.6
VTNP04004 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.06□□□□□ -1.6
VTNP04004 AC005191.1-201ENST00000603950 358 ntBASIC5.06□□□□□ -1.6
VTNP04004 RPL21P136-201ENST00000605378 396 ntBASIC5.06□□□□□ -1.6
VTNP04004 AC073111.2-201ENST00000605657 1075 ntBASIC5.06□□□□□ -1.6
VTNP04004 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.06□□□□□ -1.6
VTNP04004 OR52H1-202ENST00000641796 1061 ntBASIC5.06□□□□□ -1.6
VTNP04004 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
VTNP04004 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VTNP04004 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VTNP04004 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.06□□□□□ -1.6
VTNP04004 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VTNP04004 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
VTNP04004 AC135352.1-201ENST00000506173 1418 ntBASIC5.06□□□□□ -1.6
VTNP04004 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.06□□□□□ -1.6
VTNP04004 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
VTNP04004 CCT8P1-201ENST00000413611 1657 ntBASIC5.05□□□□□ -1.6
VTNP04004 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VTNP04004 AP000542.2-201ENST00000623199 6179 ntBASIC5.05□□□□□ -1.6
VTNP04004 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VTNP04004 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VTNP04004 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VTNP04004 AL442128.2-201ENST00000620246 1824 ntBASIC5.05□□□□□ -1.6
VTNP04004 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VTNP04004 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VTNP04004 RPL23AP59-201ENST00000399415 461 ntBASIC5.05□□□□□ -1.6
VTNP04004 AL049693.1-201ENST00000402760 611 ntBASIC5.05□□□□□ -1.6
VTNP04004 CKS1BP6-201ENST00000424932 240 ntBASIC5.05□□□□□ -1.6
VTNP04004 AL590623.1-201ENST00000427864 105 ntBASIC5.05□□□□□ -1.6
VTNP04004 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.05□□□□□ -1.6
VTNP04004 NDUFA5P1-201ENST00000433858 341 ntBASIC5.05□□□□□ -1.6
VTNP04004 GSTA7P-201ENST00000438425 448 ntBASIC5.05□□□□□ -1.6
VTNP04004 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.05□□□□□ -1.6
VTNP04004 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.05□□□□□ -1.6
VTNP04004 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VTNP04004 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
VTNP04004 AC104997.1-201ENST00000519761 717 ntBASIC5.05□□□□□ -1.6
VTNP04004 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.05□□□□□ -1.6
VTNP04004 OR8G5-201ENST00000524943 1041 ntBASIC5.05□□□□□ -1.6
VTNP04004 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.05□□□□□ -1.6
VTNP04004 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.05□□□□□ -1.6
VTNP04004 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.05□□□□□ -1.6
VTNP04004 MIR6830-201ENST00000636015 70 ntBASIC5.05□□□□□ -1.6
VTNP04004 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VTNP04004 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.05□□□□□ -1.6
VTNP04004 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VTNP04004 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
VTNP04004 VN2R3P-201ENST00000422626 1412 ntBASIC5.05□□□□□ -1.6
VTNP04004 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VTNP04004 CASC19-206ENST00000641028 1430 ntBASIC5.05□□□□□ -1.6
VTNP04004 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.04□□□□□ -1.6
VTNP04004 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTNP04004 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTNP04004 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTNP04004 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.04□□□□□ -1.6
VTNP04004 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.04□□□□□ -1.6
VTNP04004 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTNP04004 SNORA70.2-201ENST00000364506 135 ntBASIC5.04□□□□□ -1.6
VTNP04004 AL358178.1-201ENST00000407698 397 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms