Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.13□□□□□ -1.75
APOC1P02654 AC130352.1-201ENST00000602979 661 ntBASIC4.13□□□□□ -1.75
APOC1P02654 AL391358.1-201ENST00000605342 190 ntBASIC4.13□□□□□ -1.75
APOC1P02654 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
APOC1P02654 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.13□□□□□ -1.75
APOC1P02654 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
APOC1P02654 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.13□□□□□ -1.75
APOC1P02654 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
APOC1P02654 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
APOC1P02654 HSPA8P17-201ENST00000427029 1382 ntBASIC4.13□□□□□ -1.75
APOC1P02654 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOC1P02654 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOC1P02654 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC1P02654 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.12□□□□□ -1.75
APOC1P02654 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.12□□□□□ -1.75
APOC1P02654 INTS6P1-201ENST00000504674 2530 ntBASIC4.12□□□□□ -1.75
APOC1P02654 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOC1P02654 AC011155.1-201ENST00000316512 456 ntBASIC4.12□□□□□ -1.75
APOC1P02654 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
APOC1P02654 RHOT1P2-201ENST00000366423 333 ntBASIC4.12□□□□□ -1.75
APOC1P02654 RNU6-1279P-201ENST00000383917 103 ntBASIC4.12□□□□□ -1.75
APOC1P02654 AC007068.1-201ENST00000396690 844 ntBASIC4.12□□□□□ -1.75
APOC1P02654 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC1P02654 AL591848.1-201ENST00000413092 322 ntBASIC4.12□□□□□ -1.75
APOC1P02654 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.12□□□□□ -1.75
APOC1P02654 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC1P02654 OR1H1P-201ENST00000448731 937 ntBASIC4.12□□□□□ -1.75
APOC1P02654 TRY2P-201ENST00000448860 689 ntBASIC4.12□□□□□ -1.75
APOC1P02654 SEPT14P1-201ENST00000458703 648 ntBASIC4.12□□□□□ -1.75
APOC1P02654 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOC1P02654 AC093763.2-201ENST00000505334 1223 ntBASIC4.12□□□□□ -1.75
APOC1P02654 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.12□□□□□ -1.75
APOC1P02654 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.12□□□□□ -1.75
APOC1P02654 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.12□□□□□ -1.75
APOC1P02654 AL352979.3-201ENST00000553515 247 ntBASIC4.12□□□□□ -1.75
APOC1P02654 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.12□□□□□ -1.75
APOC1P02654 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC1P02654 ATP5J2P6-201ENST00000565203 266 ntBASIC4.12□□□□□ -1.75
APOC1P02654 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.12□□□□□ -1.75
APOC1P02654 AC008966.2-201ENST00000606157 453 ntBASIC4.12□□□□□ -1.75
APOC1P02654 AC090948.2-201ENST00000607363 564 ntBASIC4.12□□□□□ -1.75
APOC1P02654 AC023813.4-201ENST00000607580 580 ntBASIC4.12□□□□□ -1.75
APOC1P02654 MIR4727-201ENST00000622232 55 ntBASIC4.12□□□□□ -1.75
APOC1P02654 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
APOC1P02654 AC008725.1-201ENST00000605123 2263 ntBASIC4.12□□□□□ -1.75
APOC1P02654 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOC1P02654 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOC1P02654 CIR1P2-201ENST00000514821 1342 ntBASIC4.12□□□□□ -1.75
APOC1P02654 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOC1P02654 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOC1P02654 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
APOC1P02654 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.12□□□□□ -1.75
APOC1P02654 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
APOC1P02654 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOC1P02654 CR788268.1-201ENST00000603931 1809 ntBASIC4.11□□□□□ -1.75
APOC1P02654 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOC1P02654 AL031119.1-201ENST00000404707 1879 ntBASIC4.11□□□□□ -1.75
APOC1P02654 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOC1P02654 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOC1P02654 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOC1P02654 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOC1P02654 SNORA51.1-201ENST00000363243 140 ntBASIC4.11□□□□□ -1.75
APOC1P02654 RNU1-20P-201ENST00000363314 162 ntBASIC4.11□□□□□ -1.75
APOC1P02654 U3.30-201ENST00000391308 210 ntBASIC4.11□□□□□ -1.75
APOC1P02654 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
APOC1P02654 ARL4AP5-201ENST00000404372 599 ntBASIC4.11□□□□□ -1.75
APOC1P02654 RPL23AP27-201ENST00000415161 451 ntBASIC4.11□□□□□ -1.75
APOC1P02654 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.11□□□□□ -1.75
APOC1P02654 GTF3AP1-201ENST00000416942 1004 ntBASIC4.11□□□□□ -1.75
APOC1P02654 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.11□□□□□ -1.75
APOC1P02654 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.11□□□□□ -1.75
APOC1P02654 NANOGP6-201ENST00000429190 847 ntBASIC4.11□□□□□ -1.75
APOC1P02654 PSMD10P3-201ENST00000437000 448 ntBASIC4.11□□□□□ -1.75
APOC1P02654 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.11□□□□□ -1.75
APOC1P02654 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.11□□□□□ -1.75
APOC1P02654 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.11□□□□□ -1.75
APOC1P02654 BX284632.1-201ENST00000478218 541 ntBASIC4.11□□□□□ -1.75
APOC1P02654 RN7SL629P-201ENST00000489622 285 ntBASIC4.11□□□□□ -1.75
APOC1P02654 AC098799.3-201ENST00000506095 438 ntBASIC4.11□□□□□ -1.75
APOC1P02654 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.11□□□□□ -1.75
APOC1P02654 CYCSP28-201ENST00000534284 321 ntBASIC4.11□□□□□ -1.75
APOC1P02654 AC008033.2-201ENST00000542626 177 ntBASIC4.11□□□□□ -1.75
APOC1P02654 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.11□□□□□ -1.75
APOC1P02654 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.11□□□□□ -1.75
APOC1P02654 BGLT3-201ENST00000564523 994 ntBASIC4.11□□□□□ -1.75
APOC1P02654 AC093249.4-201ENST00000564755 259 ntBASIC4.11□□□□□ -1.75
APOC1P02654 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
APOC1P02654 AC073137.1-201ENST00000605636 634 ntBASIC4.11□□□□□ -1.75
APOC1P02654 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
APOC1P02654 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.11□□□□□ -1.75
APOC1P02654 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.11□□□□□ -1.75
APOC1P02654 MIR7154-201ENST00000620673 73 ntBASIC4.11□□□□□ -1.75
APOC1P02654 AC004232.3-201ENST00000622977 525 ntBASIC4.11□□□□□ -1.75
APOC1P02654 AL359757.1-201ENST00000623176 255 ntBASIC4.11□□□□□ -1.75
APOC1P02654 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
APOC1P02654 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.11□□□□□ -1.75
APOC1P02654 AL442639.1-201ENST00000625030 1899 ntBASIC4.11□□□□□ -1.75
APOC1P02654 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
APOC1P02654 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.11□□□□□ -1.75
APOC1P02654 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms