Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC090013.1-201ENST00000485147 480 ntBASIC5.24□□□□□ -1.57
COL4A1P02462 SNORA67.7-201ENST00000516664 135 ntBASIC5.24□□□□□ -1.57
COL4A1P02462 MIR4444-1-201ENST00000581696 74 ntBASIC5.24□□□□□ -1.57
COL4A1P02462 MIR3158-1-201ENST00000583596 81 ntBASIC5.24□□□□□ -1.57
COL4A1P02462 MIR4444-2-201ENST00000584390 74 ntBASIC5.24□□□□□ -1.57
COL4A1P02462 RNU4-89P-201ENST00000607443 133 ntBASIC5.24□□□□□ -1.57
COL4A1P02462 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL4A1P02462 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
COL4A1P02462 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.23□□□□□ -1.57
COL4A1P02462 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A1P02462 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A1P02462 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A1P02462 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A1P02462 OR13Z1P-201ENST00000416141 834 ntBASIC5.23□□□□□ -1.57
COL4A1P02462 AL691449.1-201ENST00000426570 421 ntBASIC5.23□□□□□ -1.57
COL4A1P02462 AL592156.1-201ENST00000508758 304 ntBASIC5.23□□□□□ -1.57
COL4A1P02462 PARP4P3-201ENST00000510265 317 ntBASIC5.23□□□□□ -1.57
COL4A1P02462 NPM1P41-201ENST00000512920 831 ntBASIC5.23□□□□□ -1.57
COL4A1P02462 AC007991.1-201ENST00000522680 631 ntBASIC5.23□□□□□ -1.57
COL4A1P02462 GTF2IP22-201ENST00000554443 182 ntBASIC5.23□□□□□ -1.57
COL4A1P02462 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.23□□□□□ -1.57
COL4A1P02462 BNIP3P22-201ENST00000593399 556 ntBASIC5.23□□□□□ -1.57
COL4A1P02462 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.23□□□□□ -1.57
COL4A1P02462 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.23□□□□□ -1.57
COL4A1P02462 AL021997.2-201ENST00000615674 271 ntBASIC5.23□□□□□ -1.57
COL4A1P02462 AC010480.1-201ENST00000624823 684 ntBASIC5.23□□□□□ -1.57
COL4A1P02462 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A1P02462 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A1P02462 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A1P02462 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COL4A1P02462 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A1P02462 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.23□□□□□ -1.57
COL4A1P02462 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A1P02462 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A1P02462 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL4A1P02462 SNORA70.4-201ENST00000365509 134 ntBASIC5.22□□□□□ -1.57
COL4A1P02462 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A1P02462 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL4A1P02462 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.22□□□□□ -1.57
COL4A1P02462 MIR1911-201ENST00000410783 80 ntBASIC5.22□□□□□ -1.57
COL4A1P02462 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A1P02462 AC115285.1-201ENST00000424879 736 ntBASIC5.22□□□□□ -1.57
COL4A1P02462 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.22□□□□□ -1.57
COL4A1P02462 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.22□□□□□ -1.57
COL4A1P02462 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.22□□□□□ -1.57
COL4A1P02462 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL4A1P02462 AC025175.1-201ENST00000606482 759 ntBASIC5.22□□□□□ -1.57
COL4A1P02462 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.22□□□□□ -1.57
COL4A1P02462 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL4A1P02462 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.22□□□□□ -1.57
COL4A1P02462 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A1P02462 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A1P02462 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COL4A1P02462 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A1P02462 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
COL4A1P02462 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL4A1P02462 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A1P02462 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
COL4A1P02462 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A1P02462 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.21□□□□□ -1.57
COL4A1P02462 CTSL3P-202ENST00000412179 788 ntBASIC5.21□□□□□ -1.57
COL4A1P02462 RPL36AP10-201ENST00000421785 322 ntBASIC5.21□□□□□ -1.57
COL4A1P02462 GTF3AP5-201ENST00000442645 697 ntBASIC5.21□□□□□ -1.57
COL4A1P02462 AL512326.1-201ENST00000443050 721 ntBASIC5.21□□□□□ -1.57
COL4A1P02462 MRPL48P1-201ENST00000445390 636 ntBASIC5.21□□□□□ -1.57
COL4A1P02462 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.21□□□□□ -1.57
COL4A1P02462 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.21□□□□□ -1.57
COL4A1P02462 KRT19P6-201ENST00000510983 209 ntBASIC5.21□□□□□ -1.57
COL4A1P02462 MTCO1P49-201ENST00000523429 802 ntBASIC5.21□□□□□ -1.57
COL4A1P02462 DYNLL1P4-201ENST00000549314 266 ntBASIC5.21□□□□□ -1.57
COL4A1P02462 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.21□□□□□ -1.57
COL4A1P02462 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.21□□□□□ -1.57
COL4A1P02462 AC005086.4-201ENST00000623065 213 ntBASIC5.21□□□□□ -1.57
COL4A1P02462 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
COL4A1P02462 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
COL4A1P02462 MAPK10-349ENST00000641767 3661 ntBASIC5.21□□□□□ -1.57
COL4A1P02462 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.57
COL4A1P02462 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.21□□□□□ -1.58
COL4A1P02462 FAM91A3P-201ENST00000456826 2544 ntBASIC5.21□□□□□ -1.58
COL4A1P02462 AL022323.4-201ENST00000623980 13120 ntBASIC5.21□□□□□ -1.58
COL4A1P02462 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A1P02462 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A1P02462 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A1P02462 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A1P02462 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.21□□□□□ -1.58
COL4A1P02462 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A1P02462 OR11H4-201ENST00000315409 1082 ntBASIC5.21□□□□□ -1.58
COL4A1P02462 RNU1-85P-201ENST00000364127 164 ntBASIC5.21□□□□□ -1.58
COL4A1P02462 RN7SKP182-201ENST00000410772 298 ntBASIC5.21□□□□□ -1.58
COL4A1P02462 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.21□□□□□ -1.58
COL4A1P02462 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.21□□□□□ -1.58
COL4A1P02462 RPL5P32-201ENST00000454085 879 ntBASIC5.21□□□□□ -1.58
COL4A1P02462 RN7SL132P-201ENST00000478131 296 ntBASIC5.21□□□□□ -1.58
COL4A1P02462 RN7SL812P-201ENST00000493791 279 ntBASIC5.21□□□□□ -1.58
COL4A1P02462 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.21□□□□□ -1.58
COL4A1P02462 RNA5SP497-201ENST00000516081 97 ntBASIC5.21□□□□□ -1.58
COL4A1P02462 AC023632.4-201ENST00000517783 191 ntBASIC5.21□□□□□ -1.58
COL4A1P02462 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.21□□□□□ -1.58
COL4A1P02462 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
COL4A1P02462 AC022655.2-201ENST00000577280 318 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms