Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
COL1A1P02452 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL1A1P02452 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
COL1A1P02452 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL1A1P02452 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC5.34□□□□□ -1.55
COL1A1P02452 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL1A1P02452 SPRR2C-201ENST00000290702 219 ntBASIC5.34□□□□□ -1.55
COL1A1P02452 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.34□□□□□ -1.55
COL1A1P02452 MFSD13B-201ENST00000420133 1290 ntBASIC5.34□□□□□ -1.55
COL1A1P02452 COX6CP15-201ENST00000426313 211 ntBASIC5.34□□□□□ -1.55
COL1A1P02452 BTF3P10-201ENST00000433415 495 ntBASIC5.34□□□□□ -1.55
COL1A1P02452 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL1A1P02452 SNORA84-201ENST00000459229 133 ntBASIC5.34□□□□□ -1.55
COL1A1P02452 snoU13.22-201ENST00000459428 104 ntBASIC5.34□□□□□ -1.55
COL1A1P02452 RPL23AP37-201ENST00000479658 549 ntBASIC5.34□□□□□ -1.55
COL1A1P02452 RPL35P6-201ENST00000490024 372 ntBASIC5.34□□□□□ -1.55
COL1A1P02452 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.34□□□□□ -1.55
COL1A1P02452 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.34□□□□□ -1.55
COL1A1P02452 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.34□□□□□ -1.55
COL1A1P02452 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.34□□□□□ -1.55
COL1A1P02452 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.34□□□□□ -1.55
COL1A1P02452 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.34□□□□□ -1.55
COL1A1P02452 AC009852.2-201ENST00000567898 485 ntBASIC5.34□□□□□ -1.55
COL1A1P02452 AC034105.4-201ENST00000568304 277 ntBASIC5.34□□□□□ -1.55
COL1A1P02452 MIR8069-1-201ENST00000616627 86 ntBASIC5.34□□□□□ -1.55
COL1A1P02452 MIR8069-2-201ENST00000621412 86 ntBASIC5.34□□□□□ -1.55
COL1A1P02452 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL1A1P02452 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.34□□□□□ -1.55
COL1A1P02452 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.34□□□□□ -1.55
COL1A1P02452 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
COL1A1P02452 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL1A1P02452 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL1A1P02452 AC105074.1-201ENST00000623380 3095 ntBASIC5.34□□□□□ -1.56
COL1A1P02452 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
COL1A1P02452 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL1A1P02452 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL1A1P02452 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.34□□□□□ -1.56
COL1A1P02452 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL1A1P02452 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL1A1P02452 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL1A1P02452 U3.23-201ENST00000391132 200 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 PEX12P1-201ENST00000400284 1048 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 SNORA74C-2-201ENST00000411179 201 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.33□□□□□ -1.56
COL1A1P02452 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL1A1P02452 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.33□□□□□ -1.56
COL1A1P02452 AC012671.1-201ENST00000451912 203 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 AL445433.1-201ENST00000457507 257 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 RPS20P4-201ENST00000461659 355 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 MORF4L2P1-201ENST00000503761 858 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.33□□□□□ -1.56
COL1A1P02452 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.33□□□□□ -1.56
COL1A1P02452 AC103968.1-201ENST00000557841 573 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.33□□□□□ -1.56
COL1A1P02452 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.33□□□□□ -1.56
COL1A1P02452 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.33□□□□□ -1.56
COL1A1P02452 AC006130.2-201ENST00000586202 326 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 AC079587.1-201ENST00000603846 277 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 AL160290.3-201ENST00000604869 165 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 AC099676.1-201ENST00000608886 657 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 AC015871.5-202ENST00000623252 701 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.33□□□□□ -1.56
COL1A1P02452 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.33□□□□□ -1.56
COL1A1P02452 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
COL1A1P02452 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL1A1P02452 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.33□□□□□ -1.56
COL1A1P02452 AL672167.1-203ENST00000641299 2975 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL1A1P02452 AC099654.3-201ENST00000447087 1546 ntBASIC5.33□□□□□ -1.56
COL1A1P02452 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COL1A1P02452 RPS27AP11-201ENST00000402798 447 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 FCF1P5-201ENST00000406490 482 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 RPL23AP38-201ENST00000423801 469 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.32□□□□□ -1.56
COL1A1P02452 CDY14P-201ENST00000431260 1014 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 CDY12P-201ENST00000440679 1015 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 CDY13P-201ENST00000445813 1015 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 CDY23P-201ENST00000451661 1014 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 RPS7P7-201ENST00000463499 571 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 AC008958.1-201ENST00000511047 682 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.32□□□□□ -1.56
COL1A1P02452 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
COL1A1P02452 MIR4429-201ENST00000580105 73 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.32□□□□□ -1.56
COL1A1P02452 AC005520.3-201ENST00000602874 370 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 MIR8059-201ENST00000620427 81 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
COL1A1P02452 TCP11X1-202ENST00000622971 1372 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL1A1P02452 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL1A1P02452 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL1A1P02452 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.32□□□□□ -1.56
COL1A1P02452 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL1A1P02452 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL1A1P02452 AC097461.1-201ENST00000568928 2821 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
COL1A1P02452 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL1A1P02452 AC097634.1-201ENST00000604491 2467 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 OR56B2P-201ENST00000317102 954 ntBASIC5.32□□□□□ -1.56
COL1A1P02452 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms