Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 AC004923.2-201ENST00000529649 369 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 AC087894.1-201ENST00000538359 518 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
RAPGEF3O95398 AL592494.3-201ENST00000609485 464 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 AC112200.1-201ENST00000625015 234 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 FRG1DP-201ENST00000635586 771 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RAPGEF3O95398 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 AL591135.1-201ENST00000401578 5914 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 AC012078.1-201ENST00000405035 1646 ntBASIC7.3□□□□□ -1.24
RAPGEF3O95398 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 RMST-209ENST00000639542 3269 ntTSL 5 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.3□□□□□ -1.24
RAPGEF3O95398 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 AC025031.4-201ENST00000621248 3271 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 NAMPTP1-201ENST00000440465 2514 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 LRRC37BP1-201ENST00000398851 714 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 GLUD1P9-201ENST00000420997 1173 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 AP001324.1-201ENST00000428553 399 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC7.29□□□□□ -1.24
RAPGEF3O95398 PHBP16-201ENST00000446318 950 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 AC114755.5-201ENST00000447760 831 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 AC008379.1-201ENST00000463655 464 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC7.29□□□□□ -1.24
RAPGEF3O95398 RPS3AP6-201ENST00000484430 795 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 RPS26P24-201ENST00000497656 331 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC7.29□□□□□ -1.24
RAPGEF3O95398 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.29□□□□□ -1.24
RAPGEF3O95398 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.29□□□□□ -1.24
RAPGEF3O95398 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC7.29□□□□□ -1.24
RAPGEF3O95398 MIR5699-201ENST00000578903 90 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.29□□□□□ -1.24
RAPGEF3O95398 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC7.29□□□□□ -1.24
RAPGEF3O95398 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.29□□□□□ -1.24
RAPGEF3O95398 IGKV1OR2-118-201ENST00000603238 347 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 AC026741.1-201ENST00000605892 482 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 AL023881.1-201ENST00000621088 301 ntBASIC7.29□□□□□ -1.24
RAPGEF3O95398 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC7.29□□□□□ -1.24
RAPGEF3O95398 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC7.29□□□□□ -1.24
RAPGEF3O95398 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RAPGEF3O95398 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
RAPGEF3O95398 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 HSPD1P14-201ENST00000432666 1618 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 ANAPC10P1-201ENST00000395991 556 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 FTH1P16-201ENST00000435241 552 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 RPS17P2-201ENST00000461663 408 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 AC104982.1-201ENST00000478775 574 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 RNA5SP143-201ENST00000516936 115 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 MIR2116-201ENST00000517221 80 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 AP003066.2-201ENST00000529375 555 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 AC025918.2-201ENST00000558683 763 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 AC090948.1-201ENST00000607464 549 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 RNU6-1192P-201ENST00000612197 107 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 RNU6-489P-201ENST00000618289 107 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.28□□□□□ -1.24
RAPGEF3O95398 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
RAPGEF3O95398 AC025574.1-201ENST00000554784 1653 ntBASIC7.28□□□□□ -1.24
RAPGEF3O95398 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RAPGEF3O95398 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RAPGEF3O95398 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RAPGEF3O95398 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
RAPGEF3O95398 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RAPGEF3O95398 RNU1-13P-201ENST00000384499 162 ntBASIC7.27□□□□□ -1.25
RAPGEF3O95398 TAF9BP2-201ENST00000400856 499 ntBASIC7.27□□□□□ -1.25
RAPGEF3O95398 RNA5SP317-201ENST00000410176 116 ntBASIC7.27□□□□□ -1.25
RAPGEF3O95398 RNA5SP311-201ENST00000411290 116 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms