Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.5□□□□□ -1.69
HCN1O60741 AC008147.3-201ENST00000548666 354 ntBASIC4.5□□□□□ -1.69
HCN1O60741 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.5□□□□□ -1.69
HCN1O60741 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.5□□□□□ -1.69
HCN1O60741 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.5□□□□□ -1.69
HCN1O60741 RN7SL176P-201ENST00000580352 264 ntBASIC4.5□□□□□ -1.69
HCN1O60741 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.5□□□□□ -1.69
HCN1O60741 AL031320.1-201ENST00000604177 357 ntBASIC4.5□□□□□ -1.69
HCN1O60741 uc_338.18-201ENST00000615451 175 ntBASIC4.5□□□□□ -1.69
HCN1O60741 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.5□□□□□ -1.69
HCN1O60741 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HCN1O60741 AC099654.2-201ENST00000433031 1980 ntBASIC4.5□□□□□ -1.69
HCN1O60741 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.5□□□□□ -1.69
HCN1O60741 AC090971.4-201ENST00000560291 1800 ntBASIC4.5□□□□□ -1.69
HCN1O60741 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HCN1O60741 AC092435.4-201ENST00000623012 4159 ntBASIC4.5□□□□□ -1.69
HCN1O60741 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HCN1O60741 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.5□□□□□ -1.69
HCN1O60741 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.5□□□□□ -1.69
HCN1O60741 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HCN1O60741 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HCN1O60741 AC012618.3-205ENST00000637896 1496 ntBASIC4.49□□□□□ -1.69
HCN1O60741 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCN1O60741 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HCN1O60741 ECM1P2-201ENST00000503354 1577 ntBASIC4.49□□□□□ -1.69
HCN1O60741 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HCN1O60741 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HCN1O60741 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCN1O60741 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCN1O60741 CASC19-206ENST00000641028 1430 ntBASIC4.49□□□□□ -1.69
HCN1O60741 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HCN1O60741 AL359922.3-201ENST00000624779 1670 ntBASIC4.49□□□□□ -1.69
HCN1O60741 OR10AB1P-202ENST00000641219 1686 ntBASIC4.49□□□□□ -1.69
HCN1O60741 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCN1O60741 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCN1O60741 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HCN1O60741 RNA5SP146-201ENST00000410743 123 ntBASIC4.49□□□□□ -1.69
HCN1O60741 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.49□□□□□ -1.69
HCN1O60741 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.49□□□□□ -1.69
HCN1O60741 CKS1BP6-201ENST00000424932 240 ntBASIC4.49□□□□□ -1.69
HCN1O60741 Z80107.2-201ENST00000445127 392 ntBASIC4.49□□□□□ -1.69
HCN1O60741 RPL31P53-201ENST00000457065 348 ntBASIC4.49□□□□□ -1.69
HCN1O60741 CCDC75P1-201ENST00000469247 791 ntBASIC4.49□□□□□ -1.69
HCN1O60741 DEFB109F-201ENST00000491870 277 ntBASIC4.49□□□□□ -1.69
HCN1O60741 HMGB3P14-201ENST00000494195 599 ntBASIC4.49□□□□□ -1.69
HCN1O60741 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.49□□□□□ -1.69
HCN1O60741 AF186190.1-201ENST00000517470 480 ntBASIC4.49□□□□□ -1.69
HCN1O60741 NPM1P6-201ENST00000521088 871 ntBASIC4.49□□□□□ -1.69
HCN1O60741 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.49□□□□□ -1.69
HCN1O60741 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.49□□□□□ -1.69
HCN1O60741 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.49□□□□□ -1.69
HCN1O60741 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HCN1O60741 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.49□□□□□ -1.69
HCN1O60741 AC090312.1-201ENST00000580637 348 ntBASIC4.49□□□□□ -1.69
HCN1O60741 MIR3667-201ENST00000581025 74 ntBASIC4.49□□□□□ -1.69
HCN1O60741 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.49□□□□□ -1.69
HCN1O60741 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.49□□□□□ -1.69
HCN1O60741 AC015922.4-201ENST00000612568 690 ntBASIC4.49□□□□□ -1.69
HCN1O60741 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.49□□□□□ -1.69
HCN1O60741 CR381572.2-201ENST00000624852 397 ntBASIC4.49□□□□□ -1.69
HCN1O60741 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.49□□□□□ -1.69
HCN1O60741 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCN1O60741 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HCN1O60741 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.49□□□□□ -1.69
HCN1O60741 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCN1O60741 AC132825.1-201ENST00000463573 2247 ntBASIC4.49□□□□□ -1.69
HCN1O60741 BX005019.1-201ENST00000561881 1810 ntBASIC4.49□□□□□ -1.69
HCN1O60741 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.48□□□□□ -1.69
HCN1O60741 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HCN1O60741 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCN1O60741 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCN1O60741 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HCN1O60741 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HCN1O60741 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HCN1O60741 AC009643.2-201ENST00000603543 1448 ntBASIC4.48□□□□□ -1.69
HCN1O60741 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HCN1O60741 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HCN1O60741 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HCN1O60741 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
HCN1O60741 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HCN1O60741 MIR365B-201ENST00000362317 111 ntBASIC4.48□□□□□ -1.69
HCN1O60741 RNU1-94P-201ENST00000362627 173 ntBASIC4.48□□□□□ -1.69
HCN1O60741 RN7SKP115-201ENST00000363177 317 ntBASIC4.48□□□□□ -1.69
HCN1O60741 RNU4-7P-201ENST00000364758 141 ntBASIC4.48□□□□□ -1.69
HCN1O60741 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.48□□□□□ -1.69
HCN1O60741 AL607077.1-201ENST00000401718 499 ntBASIC4.48□□□□□ -1.69
HCN1O60741 DHFRP5-201ENST00000406944 564 ntBASIC4.48□□□□□ -1.69
HCN1O60741 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.48□□□□□ -1.69
HCN1O60741 RPS26P47-201ENST00000427219 348 ntBASIC4.48□□□□□ -1.69
HCN1O60741 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.48□□□□□ -1.69
HCN1O60741 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.48□□□□□ -1.69
HCN1O60741 AL353597.2-202ENST00000434901 373 ntBASIC4.48□□□□□ -1.69
HCN1O60741 RPS26P2-201ENST00000440331 348 ntBASIC4.48□□□□□ -1.69
HCN1O60741 XKRYP6-201ENST00000440468 1116 ntBASIC4.48□□□□□ -1.69
HCN1O60741 AL357520.1-201ENST00000441557 453 ntBASIC4.48□□□□□ -1.69
HCN1O60741 XKRYP3-201ENST00000442113 1116 ntBASIC4.48□□□□□ -1.69
HCN1O60741 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.48□□□□□ -1.69
HCN1O60741 RAD1P2-201ENST00000446414 663 ntBASIC4.48□□□□□ -1.69
HCN1O60741 RHEBP2-201ENST00000450289 600 ntBASIC4.48□□□□□ -1.69
HCN1O60741 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms