Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LINC01808-202ENST00000641680 1116 ntBASIC3.55□□□□□ -1.84
SSSCA1O60232 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.55□□□□□ -1.84
SSSCA1O60232 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSSCA1O60232 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SSSCA1O60232 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSSCA1O60232 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SSSCA1O60232 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.55□□□□□ -1.84
SSSCA1O60232 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.54□□□□□ -1.84
SSSCA1O60232 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.54□□□□□ -1.84
SSSCA1O60232 AL133243.3-201ENST00000617415 3004 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.54□□□□□ -1.84
SSSCA1O60232 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SSSCA1O60232 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SSSCA1O60232 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSSCA1O60232 RNU4-4P-201ENST00000364588 130 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.54□□□□□ -1.84
SSSCA1O60232 OR1F12-201ENST00000402365 945 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.54□□□□□ -1.84
SSSCA1O60232 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.54□□□□□ -1.84
SSSCA1O60232 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.54□□□□□ -1.84
SSSCA1O60232 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.54□□□□□ -1.84
SSSCA1O60232 AL161631.1-201ENST00000417933 486 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 RPL24P2-201ENST00000421023 475 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 RBMY1KP-201ENST00000423480 476 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 NPM1P26-201ENST00000426339 738 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.54□□□□□ -1.84
SSSCA1O60232 YWHAEP5-201ENST00000431545 765 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.54□□□□□ -1.84
SSSCA1O60232 AL049745.1-201ENST00000433953 286 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 CNOT7P2-201ENST00000441051 832 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 OR52J1P-201ENST00000450596 932 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 AL121877.1-201ENST00000453704 622 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 SYT14P1-201ENST00000481459 721 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.54□□□□□ -1.84
SSSCA1O60232 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSSCA1O60232 MTND4LP2-201ENST00000502312 285 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.54□□□□□ -1.84
SSSCA1O60232 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSSCA1O60232 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SSSCA1O60232 HMGB3P26-201ENST00000560051 582 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC3.54□□□□□ -1.84
SSSCA1O60232 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.54□□□□□ -1.84
SSSCA1O60232 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.54□□□□□ -1.84
SSSCA1O60232 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.54□□□□□ -1.84
SSSCA1O60232 AC015982.1-201ENST00000608113 465 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.54□□□□□ -1.84
SSSCA1O60232 AC091905.4-201ENST00000623432 202 ntBASIC3.54□□□□□ -1.84
SSSCA1O60232 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.54□□□□□ -1.84
SSSCA1O60232 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSSCA1O60232 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.53□□□□□ -1.84
SSSCA1O60232 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSSCA1O60232 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSSCA1O60232 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSSCA1O60232 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.53□□□□□ -1.84
SSSCA1O60232 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSSCA1O60232 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SSSCA1O60232 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSSCA1O60232 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSSCA1O60232 AC021146.4-201ENST00000309229 279 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSSCA1O60232 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SSSCA1O60232 RNA5SP191-201ENST00000362585 102 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.53□□□□□ -1.84
SSSCA1O60232 AC093162.1-201ENST00000419682 124 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 RPS12P5-201ENST00000423449 371 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.53□□□□□ -1.84
SSSCA1O60232 AC007559.1-201ENST00000428736 355 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.53□□□□□ -1.84
SSSCA1O60232 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.53□□□□□ -1.84
SSSCA1O60232 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.53□□□□□ -1.84
SSSCA1O60232 MTND6P5-201ENST00000448266 512 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 TRY2P-201ENST00000448860 689 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 PPIA-203ENST00000451562 544 ntTSL 2 BASIC3.53□□□□□ -1.84
SSSCA1O60232 AC133473.1-201ENST00000455173 299 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 AC006517.1-201ENST00000480485 328 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 RPS26P15-201ENST00000488067 348 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.53□□□□□ -1.84
SSSCA1O60232 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 PDCD5P1-201ENST00000543528 309 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 AL352979.3-201ENST00000553515 247 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.53□□□□□ -1.84
SSSCA1O60232 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.53□□□□□ -1.84
SSSCA1O60232 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSSCA1O60232 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.53□□□□□ -1.84
SSSCA1O60232 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.53□□□□□ -1.84
SSSCA1O60232 AL133338.2-201ENST00000604292 736 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 RMST_9.1-201ENST00000619945 193 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 AC004808.2-201ENST00000627965 773 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.53□□□□□ -1.84
SSSCA1O60232 OR2L1P-202ENST00000641567 1023 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.53□□□□□ -1.84
SSSCA1O60232 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.53□□□□□ -1.84
SSSCA1O60232 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.53□□□□□ -1.84
SSSCA1O60232 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SSSCA1O60232 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSSCA1O60232 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.53□□□□□ -1.84
SSSCA1O60232 AC027279.1-201ENST00000568885 4284 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 KARSP3-201ENST00000571212 1504 ntBASIC3.53□□□□□ -1.84
SSSCA1O60232 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSSCA1O60232 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms