Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 snoU109.6-201ENST00000516831 118 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.45□□□□□ -1.54
PHGDHO43175 COX6B1P6-201ENST00000522347 255 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.45□□□□□ -1.54
PHGDHO43175 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.45□□□□□ -1.54
PHGDHO43175 OR8G3P-201ENST00000533406 921 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.45□□□□□ -1.54
PHGDHO43175 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 SETP1-201ENST00000556014 845 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.45□□□□□ -1.54
PHGDHO43175 AC068714.1-201ENST00000559623 800 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 SULT1C2P2-201ENST00000562517 294 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 AC009852.2-201ENST00000567898 485 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 MIR3912-201ENST00000577566 105 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 BPTFP1-201ENST00000579209 492 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PHGDHO43175 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PHGDHO43175 MIR4660-201ENST00000583549 74 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.45□□□□□ -1.54
PHGDHO43175 MIR7853-201ENST00000584820 132 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 NTAN1P1-201ENST00000603150 646 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 MRPS35P3-201ENST00000603189 709 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 AC067773.1-201ENST00000603284 1094 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 AC011453.2-201ENST00000603737 729 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 AP003392.5-201ENST00000607857 415 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 AP000255.1-201ENST00000610276 676 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 AC097478.2-201ENST00000610572 514 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 AC018926.3-201ENST00000618841 406 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.45□□□□□ -1.54
PHGDHO43175 AC129915.3-201ENST00000634128 948 ntBASIC5.45□□□□□ -1.54
PHGDHO43175 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PHGDHO43175 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PHGDHO43175 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.45□□□□□ -1.54
PHGDHO43175 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PHGDHO43175 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PHGDHO43175 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
PHGDHO43175 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.45□□□□□ -1.54
PHGDHO43175 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PHGDHO43175 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PHGDHO43175 AP005901.5-201ENST00000545779 1796 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PHGDHO43175 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PHGDHO43175 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PHGDHO43175 AL353796.1-201ENST00000561542 3241 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.44□□□□□ -1.54
PHGDHO43175 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PHGDHO43175 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.44□□□□□ -1.54
PHGDHO43175 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PHGDHO43175 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PHGDHO43175 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PHGDHO43175 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
PHGDHO43175 OR52B3P-201ENST00000314715 928 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PHGDHO43175 AC017079.1-201ENST00000333650 415 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 RNU6-304P-201ENST00000364855 107 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 RNU6-83P-201ENST00000384568 112 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 MIR16-1-201ENST00000385271 89 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 AC093719.1-202ENST00000392735 373 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.44□□□□□ -1.54
PHGDHO43175 TRGV6-201ENST00000417928 299 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 RPL21P43-201ENST00000425440 472 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 AC115283.1-201ENST00000427353 400 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.44□□□□□ -1.54
PHGDHO43175 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.44□□□□□ -1.54
PHGDHO43175 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.44□□□□□ -1.54
PHGDHO43175 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PHGDHO43175 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.44□□□□□ -1.54
PHGDHO43175 FHP1-201ENST00000442741 703 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 SETD6P1-201ENST00000444575 317 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 HMGB1P48-201ENST00000446155 598 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.44□□□□□ -1.54
PHGDHO43175 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.44□□□□□ -1.54
PHGDHO43175 VDAC2P4-201ENST00000452925 711 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 NDUFA5P9-201ENST00000472609 340 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
PHGDHO43175 GAPDHP39-201ENST00000481866 979 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.44□□□□□ -1.54
PHGDHO43175 HMGN1P9-201ENST00000515212 298 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 RNA5SP230-201ENST00000517039 122 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 RN7SKP283-201ENST00000517197 270 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 AC020937.1-201ENST00000519677 1013 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.44□□□□□ -1.54
PHGDHO43175 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.44□□□□□ -1.54
PHGDHO43175 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.44□□□□□ -1.54
PHGDHO43175 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.44□□□□□ -1.54
PHGDHO43175 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.44□□□□□ -1.54
PHGDHO43175 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.44□□□□□ -1.54
PHGDHO43175 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.44□□□□□ -1.54
PHGDHO43175 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.44□□□□□ -1.54
PHGDHO43175 AC004223.2-201ENST00000590309 544 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 AC079315.1-201ENST00000602952 623 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 AL353778.1-201ENST00000603149 408 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 SGO1P1-201ENST00000603525 1447 ntBASIC5.44□□□□□ -1.54
PHGDHO43175 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms