Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
MAP1LC3AQ9H492 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
MAP1LC3AQ9H492 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
MAP1LC3AQ9H492 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 FZD10-202ENST00000539839 3282 ntBASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.2□□□□□ -0.14
MAP1LC3AQ9H492 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 AC233992.3-201ENST00000607491 485 ntBASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MAP1LC3AQ9H492 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 AC006333.2-201ENST00000607957 2099 ntBASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 AL161938.1-201ENST00000569833 2180 ntBASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 PGM5P4-201ENST00000421970 445 ntBASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 AC007322.3-201ENST00000426526 701 ntBASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MAP1LC3AQ9H492 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms