Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hdhd3Q9CYW4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.62□□□□□ -0.23
Hdhd3Q9CYW4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Gm6576-201ENSMUST00000169678 883 ntBASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hdhd3Q9CYW4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hdhd3Q9CYW4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdhd3Q9CYW4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms