Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL25A1Q9BXS0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.83■□□□□ 0.77
COL25A1Q9BXS0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.83■□□□□ 0.77
COL25A1Q9BXS0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL25A1Q9BXS0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.83■□□□□ 0.77
COL25A1Q9BXS0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.83■□□□□ 0.77
COL25A1Q9BXS0 SEC1P-202ENST00000473944 940 ntBASIC19.83■□□□□ 0.77
COL25A1Q9BXS0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.83■□□□□ 0.77
COL25A1Q9BXS0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL25A1Q9BXS0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
COL25A1Q9BXS0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.83■□□□□ 0.77
COL25A1Q9BXS0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.83■□□□□ 0.77
COL25A1Q9BXS0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.83■□□□□ 0.77
COL25A1Q9BXS0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
COL25A1Q9BXS0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.83■□□□□ 0.76
COL25A1Q9BXS0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL25A1Q9BXS0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL25A1Q9BXS0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.83■□□□□ 0.76
COL25A1Q9BXS0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.82■□□□□ 0.76
COL25A1Q9BXS0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COL25A1Q9BXS0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL25A1Q9BXS0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.82■□□□□ 0.76
COL25A1Q9BXS0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.82■□□□□ 0.76
COL25A1Q9BXS0 SPCS2P1-201ENST00000561636 679 ntBASIC19.82■□□□□ 0.76
COL25A1Q9BXS0 AL136038.4-201ENST00000603606 1261 ntBASIC19.82■□□□□ 0.76
COL25A1Q9BXS0 AL596442.2-201ENST00000610240 980 ntBASIC19.82■□□□□ 0.76
COL25A1Q9BXS0 AC116407.3-201ENST00000623905 1129 ntBASIC19.82■□□□□ 0.76
COL25A1Q9BXS0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL25A1Q9BXS0 AC233702.3-201ENST00000578656 1387 ntBASIC19.82■□□□□ 0.76
COL25A1Q9BXS0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL25A1Q9BXS0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 LINC01124-201ENST00000409786 2117 ntBASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 HLA-V-201ENST00000429037 534 ntBASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 AC018712.1-201ENST00000455767 687 ntBASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 KRT8P20-201ENST00000423953 1409 ntBASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 AC104109.2-201ENST00000602919 1418 ntBASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.81■□□□□ 0.76
COL25A1Q9BXS0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 GK-202ENST00000378941 458 ntTSL 3 BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 AC145285.3-201ENST00000564603 959 ntBASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 RNF126P1-202ENST00000569893 925 ntBASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 PTBP1P-201ENST00000554374 1601 ntBASIC19.8■□□□□ 0.76
COL25A1Q9BXS0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 IGHV3-47-201ENST00000425060 335 ntBASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 AL645939.2-201ENST00000427340 991 ntBASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 AP006288.1-201ENST00000446065 395 ntBASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 Z69720.1-201ENST00000601483 472 ntBASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 AL355877.3-201ENST00000622820 899 ntBASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL25A1Q9BXS0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL25A1Q9BXS0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL25A1Q9BXS0 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.78■□□□□ 0.76
COL25A1Q9BXS0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.78■□□□□ 0.76
COL25A1Q9BXS0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL25A1Q9BXS0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL25A1Q9BXS0 AC211486.1-202ENST00000416371 468 ntBASIC19.78■□□□□ 0.76
COL25A1Q9BXS0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms