Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTL9Q8NET4 CA15P1-201ENST00000481698 905 ntBASIC24.01■■□□□ 1.43
RTL9Q8NET4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
RTL9Q8NET4 AC116562.4-202ENST00000641738 218 ntBASIC24.01■■□□□ 1.43
RTL9Q8NET4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTL9Q8NET4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
RTL9Q8NET4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC24.01■■□□□ 1.43
RTL9Q8NET4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC24.01■■□□□ 1.43
RTL9Q8NET4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24■■□□□ 1.43
RTL9Q8NET4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTL9Q8NET4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTL9Q8NET4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTL9Q8NET4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTL9Q8NET4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC24■■□□□ 1.43
RTL9Q8NET4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
RTL9Q8NET4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
RTL9Q8NET4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC24■■□□□ 1.43
RTL9Q8NET4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTL9Q8NET4 CCR12P-201ENST00000446203 998 ntBASIC24■■□□□ 1.43
RTL9Q8NET4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC24■■□□□ 1.43
RTL9Q8NET4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC24■■□□□ 1.43
RTL9Q8NET4 AC087388.1-201ENST00000571370 1112 ntBASIC24■■□□□ 1.43
RTL9Q8NET4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
RTL9Q8NET4 LINC01465-201ENST00000408887 1940 ntBASIC24■■□□□ 1.43
RTL9Q8NET4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RTL9Q8NET4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RTL9Q8NET4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RTL9Q8NET4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.99■■□□□ 1.43
RTL9Q8NET4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.99■■□□□ 1.43
RTL9Q8NET4 AC007663.1-201ENST00000438948 1240 ntBASIC23.99■■□□□ 1.43
RTL9Q8NET4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC23.99■■□□□ 1.43
RTL9Q8NET4 CKBP1-201ENST00000565489 1086 ntBASIC23.99■■□□□ 1.43
RTL9Q8NET4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RTL9Q8NET4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RTL9Q8NET4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RTL9Q8NET4 AC099778.1-201ENST00000568593 1911 ntBASIC23.98■■□□□ 1.43
RTL9Q8NET4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.98■■□□□ 1.43
RTL9Q8NET4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTL9Q8NET4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC23.98■■□□□ 1.43
RTL9Q8NET4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
RTL9Q8NET4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC23.98■■□□□ 1.43
RTL9Q8NET4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTL9Q8NET4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC23.98■■□□□ 1.43
RTL9Q8NET4 AL138966.2-201ENST00000621997 464 ntBASIC23.98■■□□□ 1.43
RTL9Q8NET4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.98■■□□□ 1.43
RTL9Q8NET4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTL9Q8NET4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.98■■□□□ 1.43
RTL9Q8NET4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.98■■□□□ 1.43
RTL9Q8NET4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTL9Q8NET4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RTL9Q8NET4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC23.97■■□□□ 1.43
RTL9Q8NET4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RTL9Q8NET4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTL9Q8NET4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RTL9Q8NET4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
RTL9Q8NET4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RTL9Q8NET4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.97■■□□□ 1.43
RTL9Q8NET4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTL9Q8NET4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
RTL9Q8NET4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
RTL9Q8NET4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.97■■□□□ 1.43
RTL9Q8NET4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.97■■□□□ 1.43
RTL9Q8NET4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTL9Q8NET4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
RTL9Q8NET4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTL9Q8NET4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTL9Q8NET4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RTL9Q8NET4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
RTL9Q8NET4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
RTL9Q8NET4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RTL9Q8NET4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTL9Q8NET4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.96■■□□□ 1.43
RTL9Q8NET4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RTL9Q8NET4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC23.96■■□□□ 1.43
RTL9Q8NET4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC23.96■■□□□ 1.43
RTL9Q8NET4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.96■■□□□ 1.43
RTL9Q8NET4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTL9Q8NET4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RTL9Q8NET4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RTL9Q8NET4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.96■■□□□ 1.43
RTL9Q8NET4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RTL9Q8NET4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
RTL9Q8NET4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RTL9Q8NET4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
RTL9Q8NET4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.95■■□□□ 1.43
RTL9Q8NET4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTL9Q8NET4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.95■■□□□ 1.42
RTL9Q8NET4 LIN28AP1-201ENST00000429574 405 ntBASIC23.95■■□□□ 1.42
RTL9Q8NET4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RTL9Q8NET4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
RTL9Q8NET4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.95■■□□□ 1.42
RTL9Q8NET4 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.95■■□□□ 1.42
RTL9Q8NET4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
RTL9Q8NET4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.95■■□□□ 1.42
RTL9Q8NET4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTL9Q8NET4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.95■■□□□ 1.42
RTL9Q8NET4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTL9Q8NET4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTL9Q8NET4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
RTL9Q8NET4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms