Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
RIPK4P57078 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
RIPK4P57078 KRT17P2-201ENST00000300992 1314 ntBASIC25.53■■□□□ 1.68
RIPK4P57078 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
RIPK4P57078 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIPK4P57078 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIPK4P57078 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIPK4P57078 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIPK4P57078 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIPK4P57078 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIPK4P57078 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.52■■□□□ 1.68
RIPK4P57078 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RIPK4P57078 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC25.52■■□□□ 1.68
RIPK4P57078 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIPK4P57078 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC25.52■■□□□ 1.68
RIPK4P57078 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC25.52■■□□□ 1.68
RIPK4P57078 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
RIPK4P57078 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIPK4P57078 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIPK4P57078 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIPK4P57078 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC25.52■■□□□ 1.68
RIPK4P57078 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC25.52■■□□□ 1.68
RIPK4P57078 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RIPK4P57078 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC25.51■■□□□ 1.67
RIPK4P57078 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RIPK4P57078 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RIPK4P57078 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RIPK4P57078 AL355075.4-201ENST00000554988 638 ntBASIC25.51■■□□□ 1.67
RIPK4P57078 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RIPK4P57078 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RIPK4P57078 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC25.51■■□□□ 1.67
RIPK4P57078 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RIPK4P57078 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC25.51■■□□□ 1.67
RIPK4P57078 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC25.51■■□□□ 1.67
RIPK4P57078 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RIPK4P57078 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC25.51■■□□□ 1.67
RIPK4P57078 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC25.51■■□□□ 1.67
RIPK4P57078 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
RIPK4P57078 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC25.51■■□□□ 1.67
RIPK4P57078 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC25.5■■□□□ 1.67
RIPK4P57078 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
RIPK4P57078 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
RIPK4P57078 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.5■■□□□ 1.67
RIPK4P57078 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC25.5■■□□□ 1.67
RIPK4P57078 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC25.5■■□□□ 1.67
RIPK4P57078 REXO1L10P-201ENST00000615707 1290 ntBASIC25.5■■□□□ 1.67
RIPK4P57078 REXO1L12P-201ENST00000622156 912 ntBASIC25.5■■□□□ 1.67
RIPK4P57078 AC131212.4-201ENST00000623606 975 ntBASIC25.5■■□□□ 1.67
RIPK4P57078 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC25.5■■□□□ 1.67
RIPK4P57078 AL031985.4-201ENST00000642138 673 ntBASIC25.5■■□□□ 1.67
RIPK4P57078 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RIPK4P57078 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RIPK4P57078 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
RIPK4P57078 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RIPK4P57078 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RIPK4P57078 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
RIPK4P57078 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RIPK4P57078 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RIPK4P57078 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RIPK4P57078 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RIPK4P57078 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC25.49■■□□□ 1.67
RIPK4P57078 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.49■■□□□ 1.67
RIPK4P57078 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RIPK4P57078 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RIPK4P57078 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIPK4P57078 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIPK4P57078 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RIPK4P57078 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIPK4P57078 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIPK4P57078 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIPK4P57078 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIPK4P57078 ANKRD18DP-204ENST00000455355 1975 ntBASIC25.48■■□□□ 1.67
RIPK4P57078 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RIPK4P57078 MESTP1-201ENST00000404287 994 ntBASIC25.48■■□□□ 1.67
RIPK4P57078 AC116562.2-201ENST00000507042 360 ntBASIC25.48■■□□□ 1.67
RIPK4P57078 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.48■■□□□ 1.67
RIPK4P57078 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.48■■□□□ 1.67
RIPK4P57078 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.48■■□□□ 1.67
RIPK4P57078 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.48■■□□□ 1.67
RIPK4P57078 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC25.48■■□□□ 1.67
RIPK4P57078 AL158211.5-201ENST00000623583 2518 ntBASIC25.48■■□□□ 1.67
RIPK4P57078 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIPK4P57078 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIPK4P57078 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIPK4P57078 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RIPK4P57078 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RIPK4P57078 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
RIPK4P57078 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
RIPK4P57078 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC25.47■■□□□ 1.67
RIPK4P57078 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RIPK4P57078 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC25.47■■□□□ 1.67
RIPK4P57078 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC25.47■■□□□ 1.67
RIPK4P57078 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC25.47■■□□□ 1.67
RIPK4P57078 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC25.47■■□□□ 1.67
RIPK4P57078 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.47■■□□□ 1.67
RIPK4P57078 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
RIPK4P57078 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RIPK4P57078 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RIPK4P57078 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC25.47■■□□□ 1.67
RIPK4P57078 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms