Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarce1O54941 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarce1O54941 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Smarce1O54941 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Smarce1O54941 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarce1O54941 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.83■□□□□ 0.77
Smarce1O54941 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smarce1O54941 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.83■□□□□ 0.77
Smarce1O54941 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.83■□□□□ 0.77
Smarce1O54941 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarce1O54941 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarce1O54941 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarce1O54941 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Smarce1O54941 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarce1O54941 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smarce1O54941 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Smarce1O54941 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smarce1O54941 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarce1O54941 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smarce1O54941 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Smarce1O54941 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarce1O54941 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.82■□□□□ 0.76
Smarce1O54941 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarce1O54941 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smarce1O54941 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Smarce1O54941 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarce1O54941 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarce1O54941 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smarce1O54941 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Smarce1O54941 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarce1O54941 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarce1O54941 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarce1O54941 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarce1O54941 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarce1O54941 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.81■□□□□ 0.76
Smarce1O54941 Gm15039-201ENSMUST00000118914 875 ntBASIC19.81■□□□□ 0.76
Smarce1O54941 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.81■□□□□ 0.76
Smarce1O54941 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.81■□□□□ 0.76
Smarce1O54941 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smarce1O54941 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Smarce1O54941 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smarce1O54941 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarce1O54941 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarce1O54941 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smarce1O54941 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smarce1O54941 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smarce1O54941 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.8■□□□□ 0.76
Smarce1O54941 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smarce1O54941 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarce1O54941 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.79■□□□□ 0.76
Smarce1O54941 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smarce1O54941 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarce1O54941 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Smarce1O54941 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarce1O54941 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarce1O54941 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Smarce1O54941 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarce1O54941 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarce1O54941 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smarce1O54941 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smarce1O54941 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.78■□□□□ 0.76
Smarce1O54941 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Smarce1O54941 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarce1O54941 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarce1O54941 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.78■□□□□ 0.76
Smarce1O54941 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smarce1O54941 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarce1O54941 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarce1O54941 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.78■□□□□ 0.76
Smarce1O54941 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.78■□□□□ 0.76
Smarce1O54941 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.78■□□□□ 0.76
Smarce1O54941 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smarce1O54941 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.78■□□□□ 0.76
Smarce1O54941 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smarce1O54941 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smarce1O54941 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarce1O54941 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Smarce1O54941 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarce1O54941 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Smarce1O54941 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smarce1O54941 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms