Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Gm43060-201ENSMUST00000200621 289 ntBASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Gm9847-201ENSMUST00000052528 599 ntBASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav4n-4A0A075B615 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 AC108858.1-201ENSMUST00000228461 1498 ntBASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav4n-4A0A075B615 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Flvcr1-202ENSMUST00000191946 1216 ntBASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav4n-4A0A075B615 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Gm12251-201ENSMUST00000117893 792 ntBASIC11.6□□□□□ -0.55
Trav4n-4A0A075B615 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms