Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC073648.4-201ENST00000442655 781 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 OR52J1P-201ENST00000450596 932 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC093166.2-201ENST00000455969 1017 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC022336.1-201ENST00000475510 337 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC116562.1-201ENST00000485355 781 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC083982.1-201ENST00000485679 344 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 GAPDHP56-201ENST00000506031 988 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC010468.3-201ENST00000508225 458 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 SCARNA1-201ENST00000517138 166 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 MORF4L1P3-201ENST00000525966 950 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AL158211.1-201ENST00000566763 763 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 OR1AB1P-201ENST00000585564 761 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 BNIP3P32-201ENST00000600015 554 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC020910.3-201ENST00000603701 874 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 HMGB1P51-201ENST00000605166 638 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 CR589904.2-201ENST00000612533 440 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AC025016.1-201ENST00000616746 682 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 OR10AB1P-202ENST00000641219 1686 ntBASIC5.28□□□□□ -1.56
SNX9Q9Y5X1 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 SNORD115-48-201ENST00000364764 76 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC013442.1-201ENST00000397347 228 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 MIR937-201ENST00000401271 86 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 TBCAP2-201ENST00000416175 326 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 QRSL1P2-201ENST00000418582 964 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AL772161.1-201ENST00000439130 476 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 ARL5AP3-201ENST00000439327 386 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 CYCSP24-201ENST00000445119 316 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AL591623.2-201ENST00000449978 222 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 RPL23AP56-201ENST00000460778 453 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC021660.1-201ENST00000465006 554 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 CABYRP1-201ENST00000465493 1045 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 RPL23AP73-201ENST00000492507 471 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC093801.2-201ENST00000503966 1050 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC023158.1-201ENST00000561632 1025 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC116553.2-201ENST00000564203 463 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 MIR4480-201ENST00000582492 71 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC004775.1-201ENST00000607389 753 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC004241.3-201ENST00000611728 517 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC095038.2-201ENST00000621464 1070 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AP001005.3-201ENST00000622049 129 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC091953.3-201ENST00000623220 236 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC011447.7-201ENST00000624228 1590 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 AC009452.1-201ENST00000640823 606 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 SAMMSON-226ENST00000642089 1582 ntBASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX9Q9Y5X1 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 ZNF652P1-201ENST00000442420 1309 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC073429.2-201ENST00000569694 1444 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AC132825.1-201ENST00000463573 2247 ntBASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNX9Q9Y5X1 AL357515.1-201ENST00000402967 542 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms