Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RCL1Q9Y2P8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
RCL1Q9Y2P8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RCL1Q9Y2P8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.89□□□□□ -1.79
RCL1Q9Y2P8 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RCL1Q9Y2P8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.89□□□□□ -1.79
RCL1Q9Y2P8 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.89□□□□□ -1.79
RCL1Q9Y2P8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RCL1Q9Y2P8 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.89□□□□□ -1.79
RCL1Q9Y2P8 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 TMSB4XP4-201ENST00000323496 618 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 RNA5SP435-201ENST00000364044 108 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AL031985.1-201ENST00000392713 418 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 RNA5SP178-201ENST00000410380 128 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 RNA5SP345-201ENST00000410646 108 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 EIF4EP1-201ENST00000422311 642 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 SEC63P1-201ENST00000425785 1258 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 MAPRE1P3-201ENST00000435438 796 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 OR7E125P-201ENST00000443450 846 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC239809.1-201ENST00000450470 217 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 RN7SL547P-201ENST00000490793 290 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC104109.1-201ENST00000498563 436 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 MTATP6P1-201ENST00000514057 681 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 SNORD116-26-201ENST00000516006 96 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 RNA5SP392-201ENST00000516905 112 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC008083.2-201ENST00000546707 476 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AL049839.1-201ENST00000556151 657 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC110743.1-201ENST00000584870 478 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 FO393422.1-201ENST00000603908 708 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC023509.5-201ENST00000617434 807 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AL669942.2-201ENST00000620352 697 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC127024.6-201ENST00000621598 424 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AL118496.1-201ENST00000440201 1812 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC096656.1-201ENST00000623826 1364 ntBASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
RCL1Q9Y2P8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 AL359715.4-201ENST00000606629 1436 ntBASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 AC120338.1-201ENST00000625074 1541 ntBASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 OR2X1P-201ENST00000421144 687 ntBASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 AC009965.2-201ENST00000425328 970 ntBASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 NPM1P24-201ENST00000428039 894 ntBASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 Z99127.2-201ENST00000441426 334 ntBASIC3.87□□□□□ -1.79
RCL1Q9Y2P8 HMGN1P36-201ENST00000446623 298 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms