Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 YWHAQP9-201ENST00000445891 512 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 RPL7P18-201ENST00000478965 734 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC092824.1-201ENST00000483524 576 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 RPL7P51-201ENST00000490532 749 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 RPL39P36-201ENST00000490784 156 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC104971.1-201ENST00000495117 578 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 PDLIM1P4-201ENST00000504327 1006 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 RNU6-277P-201ENST00000516272 106 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 IGHV3-32-201ENST00000519182 355 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC105029.1-201ENST00000520250 669 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 FAU-203ENST00000525297 355 ntTSL 5 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC007424.1-203ENST00000554613 687 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 OR4K7P-201ENST00000580232 945 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC012065.4-201ENST00000602445 679 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 SNRPGP17-201ENST00000603780 214 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC113139.1-201ENST00000605049 239 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AL355472.4-201ENST00000610233 626 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC099063.3-201ENST00000642066 185 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 AC117529.2-201ENST00000512159 2068 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 OLMALINC-203ENST00000641087 3779 ntBASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PDZRN3Q9UPQ7 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 PARP4P1-201ENST00000435945 2337 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AL731556.1-201ENST00000394628 3711 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 SNORD56.4-201ENST00000363883 71 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 Y_RNA.188-201ENST00000363952 111 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 GCNT1P4-201ENST00000404096 329 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 SNORA77.2-201ENST00000408571 112 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 RNU2-62P-201ENST00000410868 191 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 RANP4-201ENST00000413361 655 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AL035422.1-201ENST00000414193 397 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 USP9YP27-201ENST00000418455 438 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 OR52I1-201ENST00000450052 1050 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 RPL7P24-201ENST00000493052 752 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AC023050.1-201ENST00000498198 304 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 FABP5P6-201ENST00000510588 409 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 RN7SKP116-201ENST00000516902 319 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AP005902.1-201ENST00000521358 186 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AC037471.2-201ENST00000564941 598 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 SNORD96A-201ENST00000606577 79 ntBASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC8.32□□□□□ -1.08
PDZRN3Q9UPQ7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms