Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AP000473.2-201ENST00000602659 1537 ntBASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.63□□□□□ -1.51
CCM2LQ9NUG4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 RNU6-553P-201ENST00000364047 96 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 RNU105B-201ENST00000364478 208 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 Y_RNA.318-201ENST00000365131 97 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 RN7SKP144-201ENST00000411108 279 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AL161449.1-201ENST00000414531 1199 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 Z93019.1-201ENST00000416450 973 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC234782.4-201ENST00000417646 1048 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC016907.1-201ENST00000419483 435 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 ISCA1P2-201ENST00000438679 421 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 COX6CP18-201ENST00000448769 222 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 FAR2P1-206ENST00000449736 709 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC097262.1-201ENST00000452559 548 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 RPL37P3-201ENST00000456825 293 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC092754.2-201ENST00000463506 460 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 PPIAP19-201ENST00000486414 492 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 RNA5SP418-201ENST00000515951 117 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AP000859.1-201ENST00000525536 307 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 OR5AZ1P-201ENST00000527448 943 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 DPRXP4-201ENST00000578053 568 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC146944.4-201ENST00000602697 718 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AL022394.1-201ENST00000606979 292 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 MIR6768-201ENST00000610734 72 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC004223.4-201ENST00000612426 332 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AL139418.1-201ENST00000613613 177 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 MTCO1P7-201ENST00000419523 1542 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 CASC19-246ENST00000641625 1606 ntBASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
CCM2LQ9NUG4 AC125336.1-201ENST00000508893 2827 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 MIR323A-201ENST00000362199 86 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 RNU5D-1-201ENST00000363299 116 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 RNU6-621P-201ENST00000364752 109 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 RNU6-1300P-201ENST00000391046 108 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms