Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AC011005.3-201ENST00000491624 395 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AC105233.1-201ENST00000498840 781 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 BRD9P1-201ENST00000529855 560 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AC091042.1-201ENST00000579213 173 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AC091178.1-203ENST00000584586 279 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AL353726.1-201ENST00000614041 1000 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SIX2Q9NPC8 UGT2B26P-201ENST00000508672 1613 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 AP001273.1-201ENST00000624493 3152 ntBASIC4.93□□□□□ -1.62
SIX2Q9NPC8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AL592494.2-201ENST00000425455 1548 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 DDX6P1-205ENST00000441966 1436 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 VN1R31P-201ENST00000417498 730 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 RAD23BP1-201ENST00000421404 1227 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 YWHAZP2-201ENST00000440317 728 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AL158053.1-201ENST00000441503 453 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 CAB39P1-201ENST00000502277 460 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 HMGN1P15-201ENST00000513870 295 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AC027338.1-201ENST00000514840 825 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 MIR3934-201ENST00000579806 107 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 DNAJC19P3-201ENST00000594491 331 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 BNIP3P32-201ENST00000600015 554 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AC013244.1-201ENST00000604279 193 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AC010201.1-201ENST00000605051 540 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AC005084.1-201ENST00000605160 304 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.92□□□□□ -1.62
SIX2Q9NPC8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
SIX2Q9NPC8 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 VDAC1P9-201ENST00000412766 841 ntBASIC4.91□□□□□ -1.62
SIX2Q9NPC8 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 RPL12P3-201ENST00000440080 396 ntBASIC4.91□□□□□ -1.62
SIX2Q9NPC8 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 AC092324.1-201ENST00000468671 324 ntBASIC4.91□□□□□ -1.62
SIX2Q9NPC8 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.91□□□□□ -1.62
SIX2Q9NPC8 AC090013.1-201ENST00000485147 480 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms