Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 IGBP1P5-201ENST00000507524 1000 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC103792.1-201ENST00000603591 919 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 COX6CP4-201ENST00000605798 228 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC020634.1-201ENST00000608701 549 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 BNIP3P41-202ENST00000616656 861 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC026951.1-201ENST00000559530 2459 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC126323.6-202ENST00000568092 3511 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AL731566.1-201ENST00000620490 1937 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC090220.1-201ENST00000593078 1699 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 OR4K17-201ENST00000315543 1032 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 SDHCP2-201ENST00000398565 501 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 ST13P16-201ENST00000401760 781 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 RN7SKP97-201ENST00000410966 333 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 RPS20P14-201ENST00000412545 360 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 GTF2IP2-201ENST00000424290 697 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 RPS29P17-201ENST00000430795 166 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC112206.1-201ENST00000468416 477 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC015795.1-201ENST00000513669 327 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 RNA5SP464-201ENST00000516251 108 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC136624.4-201ENST00000573044 370 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AP005262.1-201ENST00000582646 997 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 KPNA2P3-201ENST00000584190 848 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 ADAD1P2-201ENST00000588476 646 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC010201.1-201ENST00000605051 540 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AL591034.3-201ENST00000605511 685 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC006338.2-201ENST00000616864 791 ntBASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
KIAA1549Q9HCM3 AC108751.5-201ENST00000492880 1336 ntBASIC4.03□□□□□ -1.77
KIAA1549Q9HCM3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AL591623.2-201ENST00000449978 222 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 PARP1P2-201ENST00000556806 195 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 MIR4675-201ENST00000577898 77 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AC023762.1-201ENST00000603280 584 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AC067959.1-201ENST00000604334 379 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AC083843.3-201ENST00000623679 2186 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AC017104.4-201ENST00000636283 1592 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AC021242.1-201ENST00000507315 2035 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 RNA5SP509-201ENST00000364577 119 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 NPM1P38-201ENST00000403835 865 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AL139095.3-201ENST00000419672 1203 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 AL935212.3-201ENST00000450729 284 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 DEFB109F-201ENST00000491870 277 ntBASIC4.02□□□□□ -1.77
KIAA1549Q9HCM3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms