Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SEC61A2Q9H9S3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SEC61A2Q9H9S3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SEC61A2Q9H9S3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SEC61A2Q9H9S3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.53
SEC61A2Q9H9S3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
SEC61A2Q9H9S3 AL121839.2-201ENST00000565058 6943 ntBASIC5.46□□□□□ -1.53
SEC61A2Q9H9S3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 RNA5SP375-201ENST00000362975 119 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 RNU6-660P-201ENST00000364566 109 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 RN7SKP187-201ENST00000365536 330 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AL672167.2-201ENST00000377164 879 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 RNU6-114P-201ENST00000384704 105 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 GCNT1P4-201ENST00000404096 329 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 RNA5SP431-201ENST00000410312 120 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 RNU2-18P-201ENST00000411224 162 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC019050.1-201ENST00000418508 492 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 RNGTTP1-201ENST00000420965 728 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AL109913.1-201ENST00000421173 514 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC066692.1-201ENST00000421721 457 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 FAM96AP1-201ENST00000430879 482 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 CDY14P-201ENST00000431260 1014 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 MTCO2P25-201ENST00000447065 681 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 TPT1P14-201ENST00000448018 505 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AP000542.1-201ENST00000448473 371 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AL591363.1-201ENST00000450091 483 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 HIGD1AP16-201ENST00000450986 258 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 CDY23P-201ENST00000451661 1014 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC118758.1-202ENST00000454719 225 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 RN7SL168P-201ENST00000463821 279 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AL121769.1-201ENST00000469473 401 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC074344.1-201ENST00000512823 224 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 RNU6-314P-201ENST00000516574 104 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 DEFB108A-201ENST00000530110 222 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC036111.2-201ENST00000533247 901 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AP001858.2-201ENST00000536213 601 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 SNORA59B-202ENST00000578183 701 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC020916.2-201ENST00000591242 360 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AL591167.1-201ENST00000607321 456 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AL159169.3-201ENST00000608871 561 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC004948.1-201ENST00000609858 672 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AL137067.2-201ENST00000621202 131 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC007342.8-201ENST00000623278 678 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC024023.1-201ENST00000624530 922 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC073869.7-201ENST00000640874 297 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC087516.1-201ENST00000561236 2428 ntBASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SEC61A2Q9H9S3 AC024651.2-201ENST00000562480 2098 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms