Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RNA5SP183-201ENST00000362452 119 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 RNA5SP443-201ENST00000363083 132 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 RNU6-1283P-201ENST00000365314 105 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 SPTLC1P2-201ENST00000407089 121 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 MIR1286-201ENST00000408112 78 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 RPSAP35-201ENST00000413753 818 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC006960.1-201ENST00000419980 153 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 CENPIP1-201ENST00000425713 902 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 CYCSP6-201ENST00000434498 302 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 KRT8P51-201ENST00000438938 274 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 TPMTP4-201ENST00000450749 678 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AL035090.1-201ENST00000454835 332 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 RN7SL610P-201ENST00000463845 291 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC005532.2-201ENST00000467154 373 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC092045.1-201ENST00000495716 1231 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC137627.1-201ENST00000545761 289 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AKIRIN1P1-201ENST00000547384 544 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AL121766.1-201ENST00000547436 487 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 CCNG2P1-201ENST00000549521 1000 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 OR11J2P-201ENST00000555298 907 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC018558.5-201ENST00000565840 952 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 ISCA1P3-201ENST00000577104 373 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 MIR4311-201ENST00000580794 100 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 MIR4999-201ENST00000585029 91 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 VN1R82P-201ENST00000601481 356 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AF131215.7-201ENST00000602443 707 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC079089.3-201ENST00000603094 673 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC096553.1-201ENST00000605169 829 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AL031775.1-201ENST00000607014 887 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 OR2BH1P-201ENST00000608850 864 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC099842.1-201ENST00000619919 596 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 NCOA4P2-201ENST00000340589 1813 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC017007.4-201ENST00000503353 1352 ntBASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
BCAS3Q9H6U6 AC073429.2-201ENST00000569694 1444 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 U3.2-201ENST00000362981 210 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 SNORA74A-201ENST00000364089 198 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 SNORA58B-201ENST00000364259 136 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 RNU4-2-201ENST00000365668 141 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 RNU6-31P-201ENST00000384388 108 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC005042.1-201ENST00000393397 800 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 OR4K12P-201ENST00000406538 961 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC007161.1-204ENST00000423039 460 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC012519.1-201ENST00000424588 610 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 DPRXP1-201ENST00000426312 460 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 NANOGP4-201ENST00000427230 913 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 LDHAP2-201ENST00000437325 985 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 AL596266.1-201ENST00000448132 400 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 RPS23P9-201ENST00000448848 438 ntBASIC6.25□□□□□ -1.41
BCAS3Q9H6U6 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms